Literature DB >> 26967552

Docking and ADMET prediction of few GSK-3 inhibitors divulges 6-bromoindirubin-3-oxime as a potential inhibitor.

Chaluveelaveedu Murleedharan Nisha1, Ashwini Kumar1, Archana Vimal1, Bhukya Mounika Bai1, Dharm Pal2, Awanish Kumar3.   

Abstract

GSK-3 is a member of cellular kinases with diversified functions such as cellular differentiation, metabolic signaling, neuronal functions and apoptosis. It has been validated as an important therapeutic target in Alzheimer's disease and type 2 diabetes. Few molecules targeting GSK-3 are currently in clinical trials. In this study, we have compared certain docking and computational ADME (Absorption, Distribution, Metabolism, Excretion) parameters of a few GSK-3 targeted ligands (Indirubin, Hymenialdisine, Meridianins, 6-bromoindirubin-3-oxime) against two control molecules (Tideglusib and LY-2090314) to derive and analyze the basic drug-like properties of the test compounds. Docking between the GSK-3 and various ligands was done using AutoDock while ADME parameters were derived from ADMET server PreADMET and admetSAR. Various docked images were retrieved from docking, indicating the docking sites in the target protein. Out of four compounds tested, 6-bromoindirubin-3-oxime (6-BIO) was found as the best docking and ADME parameters, followed by Hymenialdisine (HMD). The LigPlot interaction results show two residues Leu (188) and Thr (138) to be common at the interaction site. The LD50 of 6-BIO is better than one of the control ligands while very similar to the other. Some of the parameters were very similar to the control ligands, thus, making it a suitable candidate among the test ligands. From this in-silico study, we concluded that 6-BIO is a potent drug candidate which could be further tested in vitro and in vivo to establish a drug molecule. Since, 6-BIO is a chemically modified form of the basic molecule Indirubin, we can hypothesize that certain other modified indirubins could be tested as GSK-3 targeted ligands.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  6-Bromoindirubin-3-oxime; ADMET; Docking; Drug candidate; GSK-3

Mesh:

Substances:

Year:  2016        PMID: 26967552     DOI: 10.1016/j.jmgm.2016.03.001

Source DB:  PubMed          Journal:  J Mol Graph Model        ISSN: 1093-3263            Impact factor:   2.518


  9 in total

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Journal:  Autophagy       Date:  2017-03-28       Impact factor: 16.016

4.  Evaluation of Novel Dual Acetyl- and Butyrylcholinesterase Inhibitors as Potential Anti-Alzheimer's Disease Agents Using Pharmacophore, 3D-QSAR, and Molecular Docking Approaches.

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Review 5.  Recent Developments in New Therapeutic Agents against Alzheimer and Parkinson Diseases: In-Silico Approaches.

Authors:  Pedro Cruz-Vicente; Luís A Passarinha; Samuel Silvestre; Eugenia Gallardo
Journal:  Molecules       Date:  2021-04-11       Impact factor: 4.411

6.  Mollusc-Derived Brominated Indoles for the Selective Inhibition of Cyclooxygenase: A Computational Expedition.

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Journal:  Molecules       Date:  2021-10-29       Impact factor: 4.411

7.  Screening of Potential Breast Cancer Inhibitors through Molecular Docking and Molecular Dynamics Simulation.

Authors:  Sangavi Pandi; Langeswaran Kulanthaivel; Gowtham Kumar Subbaraj; Sangeetha Rajaram; Senthilkumar Subramanian
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Review 8.  Oximes: Novel Therapeutics with Anticancer and Anti-Inflammatory Potential.

Authors:  Igor A Schepetkin; Mark B Plotnikov; Andrei I Khlebnikov; Tatiana M Plotnikova; Mark T Quinn
Journal:  Biomolecules       Date:  2021-05-22

9.  Predictive modeling by deep learning, virtual screening and molecular dynamics study of natural compounds against SARS-CoV-2 main protease.

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  9 in total

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