Literature DB >> 26965427

Application of DNA barcoding for identifying forensically relevant Diptera from northern Thailand.

Barbara Karolina Zajac1, Narin Sontigun2, Anchalee Wannasan2, Marcel A Verhoff3, Kabkaew Sukontason2, Jens Amendt3, Richard Zehner3.   

Abstract

In recent decades, forensic entomology has become a useful tool in criminal investigations all over the world. Species-specific identification of flies plays an important role in this field and is obligatory for accurate calculation of the post-mortem interval. However, not all important colonizers of a corpse can be identified by common morphological keys. Due to similar morphology and the lack of keys for some taxa, especially for immature stages, DNA barcoding has become more popular during the last recent years. This development is particularly important for countries like Thailand, in which forensic entomology is a newly developing research area and which faces several challenges such as a high biodiversity of fly species. The most commonly used barcoding region in forensic entomology, the mitochondrial cytochrome oxidase subunit 1 (coI) gene, as well as a 1000-bp-long region of the 28S nuclear rRNA gene, was used to analyze and establish the molecular barcodes of 13 different species of flies of forensic relevance in northern Thailand.

Entities:  

Keywords:  28S; Barcoding; Forensic entomology; Identification success; Thailand; coI

Mesh:

Substances:

Year:  2016        PMID: 26965427     DOI: 10.1007/s00436-016-4977-6

Source DB:  PubMed          Journal:  Parasitol Res        ISSN: 0932-0113            Impact factor:   2.289


  59 in total

1.  Genetic identification of forensically important flesh flies (Diptera: Sarcophagidae).

Authors:  Richard Zehner; Jens Amendt; Svenja Schütt; Jan Sauer; Roman Krettek; Dalibor Povolný
Journal:  Int J Legal Med       Date:  2004-04-24       Impact factor: 2.686

2.  Estimation of the number of nucleotide substitutions when there are strong transition-transversion and G+C-content biases.

Authors:  K Tamura
Journal:  Mol Biol Evol       Date:  1992-07       Impact factor: 16.240

Review 3.  DNA barcoding in animal species: progress, potential and pitfalls.

Authors:  John Waugh
Journal:  Bioessays       Date:  2007-02       Impact factor: 4.345

4.  The Muscoidea (Diptera: Calyptratae) are paraphyletic: Evidence from four mitochondrial and four nuclear genes.

Authors:  Sujatha Narayanan Kutty; Thomas Pape; Adrian Pont; Brian M Wiegmann; Rudolf Meier
Journal:  Mol Phylogenet Evol       Date:  2008-08-29       Impact factor: 4.286

5.  Forensically important flesh fly species in Thailand: morphology and developmental rate.

Authors:  Kom Sukontason; Nophawan Bunchu; Tarinee Chaiwong; Kittikhun Moophayak; Kabkaew L Sukontason
Journal:  Parasitol Res       Date:  2010-02-10       Impact factor: 2.289

6.  ABGD, Automatic Barcode Gap Discovery for primary species delimitation.

Authors:  N Puillandre; A Lambert; S Brouillet; G Achaz
Journal:  Mol Ecol       Date:  2011-08-29       Impact factor: 6.185

7.  Identification of sarcosaprophagous Diptera species through DNA barcoding in wildlife forensics.

Authors:  Eva A Rolo; Ana Rita Oliveira; Catarina G Dourado; Ana Farinha; Maria Teresa Rebelo; Deodália Dias
Journal:  Forensic Sci Int       Date:  2013-05-10       Impact factor: 2.395

Review 8.  Forensic entomology: applications and limitations.

Authors:  J Amendt; C S Richards; C P Campobasso; R Zehner; M J R Hall
Journal:  Forensic Sci Med Pathol       Date:  2011-01-07       Impact factor: 2.007

Review 9.  Forensic entomology cases in Thailand: a review of cases from 2000 to 2006.

Authors:  Kom Sukontason; Paitoon Narongchai; Chaturong Kanchai; Karnda Vichairat; Pongruk Sribanditmongkol; Tanin Bhoopat; Hiromu Kurahashi; Manoch Chockjamsai; Somsak Piangjai; Nophawan Bunchu; Somsak Vongvivach; Wirachai Samai; Tarinee Chaiwong; Rungkanta Methanitikorn; Rachadawan Ngern-Klun; Duanghatai Sripakdee; Worachote Boonsriwong; Sirisuda Siriwattanarungsee; Chaowakit Srimuangwong; Boonsak Hanterdsith; Khankam Chaiwan; Chalard Srisuwan; Surasak Upakut; Kittikhun Moopayak; Roy C Vogtsberger; Jimmy K Olson; Kabkaew L Sukontason
Journal:  Parasitol Res       Date:  2007-07-24       Impact factor: 2.289

10.  DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates.

Authors:  O Folmer; M Black; W Hoeh; R Lutz; R Vrijenhoek
Journal:  Mol Mar Biol Biotechnol       Date:  1994-10
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  9 in total

1.  Molecular and morphometric divergence of four species of butterflies (Nymphalidae and Pieridae) from the Western Himalaya, India.

Authors:  Vinaya Kumar Singh; Prakash Chandra Joshi; Sandeep Kumar Gupta
Journal:  Mol Biol Rep       Date:  2020-10-18       Impact factor: 2.316

2.  Wing morphometrics as a tool in species identification of forensically important blow flies of Thailand.

Authors:  Narin Sontigun; Kabkaew L Sukontason; Barbara K Zajac; Richard Zehner; Kom Sukontason; Anchalee Wannasan; Jens Amendt
Journal:  Parasit Vectors       Date:  2017-05-10       Impact factor: 3.876

3.  Forensically Important Blow Flies Chrysomya pinguis, C. villeneuvi, and Lucilia porphyrina (Diptera: Calliphoridae) in a Case of Human Remains in Thailand.

Authors:  Tawatchai Monum; Kabkaew L Sukontason; Pongruk Sribanditmongkol; Kom Sukontason; Chutharat Samerjai; Kwankamol Limsopatham; Suttida Suwannayod; Tunwadee Klong-Klaew; Anchalee Wannasan
Journal:  Korean J Parasitol       Date:  2017-02-28       Impact factor: 1.341

4.  Predicting Geographic Distribution of Forensically Significant Blow Flies of Subfamily Chrysomyinae (Diptera: Calliphoridae) in Northern Thailand.

Authors:  Tunwadee Klong-Klaew; Ratchadawan Ngoen-Klan; Kittikhun Moophayak; Kom Sukontason; Kim N Irvine; Jeffery K Tomberlin; Pradya Somboon; Theeraphap Chareonviriyaphap; Hiromu Kurahashi; Kabkaew L Sukontason
Journal:  Insects       Date:  2018-08-21       Impact factor: 2.769

5.  Chrysomya chani Kurahashi (Diptera: Calliphoridae), a blow fly species of forensic importance: morphological characters of the third larval instar and a case report from Thailand.

Authors:  Kabkaew L Sukontason; Tanin Bhoopat; Anchalee Wannasan; Narin Sontigun; Sangob Sanit; Jens Amendt; Chutharat Samerjai; Kom Sukontason
Journal:  Forensic Sci Res       Date:  2018-02-09

6.  The gut bacteria across life stages in the synanthropic fly Chrysomya megacephala.

Authors:  Xiaoyun Wang; Qiao Gao; Wanqiang Wang; Xiaoping Wang; Chaoliang Lei; Fen Zhu
Journal:  BMC Microbiol       Date:  2018-10-11       Impact factor: 3.605

Review 7.  A brief review of forensically important flesh flies (Diptera: Sarcophagidae).

Authors:  Lipin Ren; Yanjie Shang; Wei Chen; Fanming Meng; Jifeng Cai; Guanghui Zhu; Lushi Chen; Yong Wang; Jianqiang Deng; Yadong Guo
Journal:  Forensic Sci Res       Date:  2018-03-22

8.  The uses of Chrysomya megacephala (Fabricius, 1794) (Diptera: Calliphoridae) in forensic entomology.

Authors:  Rozane Badenhorst; Martin H Villet
Journal:  Forensic Sci Res       Date:  2018-03-21

9.  Mitochondrial DNA-Based Identification of Forensically Important Flesh Flies (Diptera: Sarcophagidae) in Thailand.

Authors:  Chutharat Samerjai; Kabkaew L Sukontason; Narin Sontigun; Kom Sukontason; Tunwadee Klong-Klaew; Theeraphap Chareonviriyaphap; Hiromu Kurahashi; Sven Klimpel; Judith Kochmann; Atiporn Saeung; Pradya Somboon; Anchalee Wannasan
Journal:  Insects       Date:  2019-12-18       Impact factor: 2.769

  9 in total

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