Literature DB >> 26951676

Noise-driven growth rate gain in clonal cellular populations.

Mikihiro Hashimoto1, Takashi Nozoe1, Hidenori Nakaoka1, Reiko Okura1, Sayo Akiyoshi1, Kunihiko Kaneko2, Edo Kussell3, Yuichi Wakamoto4.   

Abstract

Cellular populations in both nature and the laboratory are composed of phenotypically heterogeneous individuals that compete with each other resulting in complex population dynamics. Predicting population growth characteristics based on knowledge of heterogeneous single-cell dynamics remains challenging. By observing groups of cells for hundreds of generations at single-cell resolution, we reveal that growth noise causes clonal populations of Escherichia coli to double faster than the mean doubling time of their constituent single cells across a broad set of balanced-growth conditions. We show that the population-level growth rate gain as well as age structures of populations and of cell lineages in competition are predictable. Furthermore, we theoretically reveal that the growth rate gain can be linked with the relative entropy of lineage generation time distributions. Unexpectedly, we find an empirical linear relation between the means and the variances of generation times across conditions, which provides a general constraint on maximal growth rates. Together, these results demonstrate a fundamental benefit of noise for population growth, and identify a growth law that sets a "speed limit" for proliferation.

Entities:  

Keywords:  age-structured population model; cell lineage analysis; growth law; growth noise; microfluidics

Mesh:

Year:  2016        PMID: 26951676      PMCID: PMC4812751          DOI: 10.1073/pnas.1519412113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

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Authors:  M SCHAECHTER; J P WILLIAMSON; J R HOOD; A L KOCH
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Authors:  E O POWELL
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6.  On the Theory of Age-Dependent Stochastic Branching Processes.

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Journal:  Proc Natl Acad Sci U S A       Date:  1948-12       Impact factor: 11.205

7.  On the distribution of state values of reproducing cells.

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8.  Scaling laws governing stochastic growth and division of single bacterial cells.

Authors:  Srividya Iyer-Biswas; Charles S Wright; Jonathan T Henry; Klevin Lo; Stanislav Burov; Yihan Lin; Gavin E Crooks; Sean Crosson; Aaron R Dinner; Norbert F Scherer
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-27       Impact factor: 11.205

9.  Individual histories and selection in heterogeneous populations.

Authors:  Stanislas Leibler; Edo Kussell
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-02       Impact factor: 11.205

10.  Pre-disposition and epigenetics govern variation in bacterial survival upon stress.

Authors:  Ming Ni; Antoine L Decrulle; Fanette Fontaine; Alice Demarez; Francois Taddei; Ariel B Lindner
Journal:  PLoS Genet       Date:  2012-12-20       Impact factor: 5.917

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  39 in total

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Authors:  A Barizien; M S Suryateja Jammalamadaka; G Amselem; Charles N Baroud
Journal:  J R Soc Interface       Date:  2019-04-26       Impact factor: 4.118

Review 2.  Fundamental principles in bacterial physiology-history, recent progress, and the future with focus on cell size control: a review.

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Journal:  Rep Prog Phys       Date:  2018-01-09

3.  Robust, linear correlations between growth rates and β-lactam-mediated lysis rates.

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Journal:  Proc Natl Acad Sci U S A       Date:  2018-04-02       Impact factor: 11.205

4.  Simulating Genetic Circuits in Bacterial Populations with Growth Heterogeneity.

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Journal:  Biophys J       Date:  2018-01-23       Impact factor: 4.033

5.  The interplay of phenotypic variability and fitness in finite microbial populations.

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Journal:  J R Soc Interface       Date:  2020-05-13       Impact factor: 4.118

6.  Analysis of Noise Mechanisms in Cell-Size Control.

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7.  Initial cell density encodes proliferative potential in cancer cell populations.

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8.  Fitness effects of altering gene expression noise in Saccharomyces cerevisiae.

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Journal:  Elife       Date:  2018-08-20       Impact factor: 8.140

9.  Invariance of Initiation Mass and Predictability of Cell Size in Escherichia coli.

Authors:  Fangwei Si; Dongyang Li; Sarah E Cox; John T Sauls; Omid Azizi; Cindy Sou; Amy B Schwartz; Michael J Erickstad; Yonggun Jun; Xintian Li; Suckjoon Jun
Journal:  Curr Biol       Date:  2017-04-13       Impact factor: 10.834

10.  Ergodicity, hidden bias and the growth rate gain.

Authors:  Nash D Rochman; Dan M Popescu; Sean X Sun
Journal:  Phys Biol       Date:  2018-03-14       Impact factor: 2.583

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