Literature DB >> 21097934

Interdependence of cell growth and gene expression: origins and consequences.

Matthew Scott1, Carl W Gunderson, Eduard M Mateescu, Zhongge Zhang, Terence Hwa.   

Abstract

In bacteria, the rate of cell proliferation and the level of gene expression are intimately intertwined. Elucidating these relations is important both for understanding the physiological functions of endogenous genetic circuits and for designing robust synthetic systems. We describe a phenomenological study that reveals intrinsic constraints governing the allocation of resources toward protein synthesis and other aspects of cell growth. A theory incorporating these constraints can accurately predict how cell proliferation and gene expression affect one another, quantitatively accounting for the effect of translation-inhibiting antibiotics on gene expression and the effect of gratuitous protein expression on cell growth. The use of such empirical relations, analogous to phenomenological laws, may facilitate our understanding and manipulation of complex biological systems before underlying regulatory circuits are elucidated.

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Year:  2010        PMID: 21097934     DOI: 10.1126/science.1192588

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  436 in total

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Journal:  EMBO Rep       Date:  2012-02-01       Impact factor: 8.807

2.  Dislocation-mediated growth of bacterial cell walls.

Authors:  Ariel Amir; David R Nelson
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-01       Impact factor: 11.205

3.  On the rapidity of antibiotic resistance evolution facilitated by a concentration gradient.

Authors:  Rutger Hermsen; J Barrett Deris; Terence Hwa
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-18       Impact factor: 11.205

4.  Bistability and oscillations in co-repressive synthetic microbial consortia.

Authors:  Mehdi Sadeghpour; Alan Veliz-Cuba; Gábor Orosz; Krešimir Josić; Matthew R Bennett
Journal:  Quant Biol       Date:  2017-03-30

5.  Ribosomes are optimized for autocatalytic production.

Authors:  Shlomi Reuveni; Måns Ehrenberg; Johan Paulsson
Journal:  Nature       Date:  2017-07-19       Impact factor: 49.962

6.  Escherichia coli translation strategies differ across carbon, nitrogen and phosphorus limitation conditions.

Authors:  Sophia Hsin-Jung Li; Zhiyuan Li; Junyoung O Park; Christopher G King; Joshua D Rabinowitz; Ned S Wingreen; Zemer Gitai
Journal:  Nat Microbiol       Date:  2018-07-23       Impact factor: 17.745

7.  The innate growth bistability and fitness landscapes of antibiotic-resistant bacteria.

Authors:  J Barrett Deris; Minsu Kim; Zhongge Zhang; Hiroyuki Okano; Rutger Hermsen; Alexander Groisman; Terence Hwa
Journal:  Science       Date:  2013-11-29       Impact factor: 47.728

8.  The paths of mortality: how understanding the biology of aging can help explain systems behavior of single cells.

Authors:  Matthew M Crane; Matt Kaeberlein
Journal:  Curr Opin Syst Biol       Date:  2017-12-06

9.  Overcoming heterologous protein interdependency to optimize P450-mediated Taxol precursor synthesis in Escherichia coli.

Authors:  Bradley Walters Biggs; Chin Giaw Lim; Kristen Sagliani; Smriti Shankar; Gregory Stephanopoulos; Marjan De Mey; Parayil Kumaran Ajikumar
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-07       Impact factor: 11.205

Review 10.  Tumour heterogeneity and the evolutionary trade-offs of cancer.

Authors:  Jean Hausser; Uri Alon
Journal:  Nat Rev Cancer       Date:  2020-02-24       Impact factor: 60.716

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