Literature DB >> 26946044

Interpreting phenotypic antibiotic tolerance and persister cells as evolution via epigenetic inheritance.

Troy Day1,2,3.   

Abstract

Epigenetic inheritance is the transmission of nongenetic material such as gene expression levels, RNA and other biomolecules from parents to offspring. There is a growing realization that such forms of inheritance can play an important role in evolution. Bacteria represent a prime example of epigenetic inheritance because a large array of cellular components is transmitted to offspring, in addition to genetic material. Interestingly, there is an extensive and growing empirical literature showing that many bacteria can form 'persister' cells that are phenotypically resistant or tolerant to antibiotics, but most of these results are not interpreted within the context of epigenetic inheritance. Instead, persister cells are usually viewed as a genetically encoded bet-hedging strategy that has evolved in response to a fluctuating environment. Here I show, using a relatively simple model, that many of these empirical findings can be more simply understood as arising from a combination of epigenetic inheritance and cellular noise. I therefore suggest that phenotypic drug tolerance in bacteria might represent one of the best-studied examples of evolution under epigenetic inheritance.
© 2016 John Wiley & Sons Ltd.

Entities:  

Keywords:  antibiotic resistance; dormancy; drug resistance; infectious disease; nongenetic; transgenerational inheritance

Mesh:

Substances:

Year:  2016        PMID: 26946044      PMCID: PMC4846567          DOI: 10.1111/mec.13603

Source DB:  PubMed          Journal:  Mol Ecol        ISSN: 0962-1083            Impact factor:   6.185


  66 in total

Review 1.  Heterogeneous bacterial persisters and engineering approaches to eliminate them.

Authors:  Kyle R Allison; Mark P Brynildsen; James J Collins
Journal:  Curr Opin Microbiol       Date:  2011-09-19       Impact factor: 7.934

2.  Bacterial persistence as a phenotypic switch.

Authors:  Nathalie Q Balaban; Jack Merrin; Remy Chait; Lukasz Kowalik; Stanislas Leibler
Journal:  Science       Date:  2004-08-12       Impact factor: 47.728

3.  Phenotypic diversity, population growth, and information in fluctuating environments.

Authors:  Edo Kussell; Stanislas Leibler
Journal:  Science       Date:  2005-08-25       Impact factor: 47.728

4.  Growth feedback as a basis for persister bistability.

Authors:  Jingchen Feng; David A Kessler; Eshel Ben-Jacob; Herbert Levine
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-16       Impact factor: 11.205

Review 5.  Transgenerational epigenetic effects.

Authors:  Neil A Youngson; Emma Whitelaw
Journal:  Annu Rev Genomics Hum Genet       Date:  2008       Impact factor: 8.929

Review 6.  Epigenetic switches: can infidelity govern fate in microbes?

Authors:  Dominik Satory; Alasdair J E Gordon; Jennifer A Halliday; Christophe Herman
Journal:  Curr Opin Microbiol       Date:  2011-04       Impact factor: 7.934

7.  Bacterial persistence: a model of survival in changing environments.

Authors:  Edo Kussell; Roy Kishony; Nathalie Q Balaban; Stanislas Leibler
Journal:  Genetics       Date:  2005-01-31       Impact factor: 4.562

8.  Persister cells and tolerance to antimicrobials.

Authors:  Iris Keren; Niilo Kaldalu; Amy Spoering; Yipeng Wang; Kim Lewis
Journal:  FEMS Microbiol Lett       Date:  2004-01-15       Impact factor: 2.742

9.  Role of global regulators and nucleotide metabolism in antibiotic tolerance in Escherichia coli.

Authors:  Sonja Hansen; Kim Lewis; Marin Vulić
Journal:  Antimicrob Agents Chemother       Date:  2008-06-02       Impact factor: 5.191

10.  Pharmacodynamics, population dynamics, and the evolution of persistence in Staphylococcus aureus.

Authors:  Paul J T Johnson; Bruce R Levin
Journal:  PLoS Genet       Date:  2013-01-03       Impact factor: 5.917

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  6 in total

Review 1.  Antibiotic Resistance and Epigenetics: More to It than Meets the Eye.

Authors:  Dipannita Ghosh; Balaji Veeraraghavan; Ravikrishnan Elangovan; Perumal Vivekanandan
Journal:  Antimicrob Agents Chemother       Date:  2020-01-27       Impact factor: 5.191

2.  Collective behavior and nongenetic inheritance allow bacterial populations to adapt to changing environments.

Authors:  Henry H Mattingly; Thierry Emonet
Journal:  Proc Natl Acad Sci U S A       Date:  2022-06-21       Impact factor: 12.779

Review 3.  Epigenetic-Mediated Antimicrobial Resistance: Host versus Pathogen Epigenetic Alterations.

Authors:  Jibran Sualeh Muhammad; Naveed Ahmed Khan; Sutherland K Maciver; Ahmad M Alharbi; Hasan Alfahemi; Ruqaiyyah Siddiqui
Journal:  Antibiotics (Basel)       Date:  2022-06-16

4.  Clinical epigenetics and multidrug-resistant bacterial infections: host remodelling in critical illness.

Authors:  Ettore Crimi; Giuditta Benincasa; Silvia Cirri; Rebecca Mutesi; Mario Faenza; Claudio Napoli
Journal:  Epigenetics       Date:  2020-04-14       Impact factor: 4.528

Review 5.  Adaptive Metabolism in Staphylococci: Survival and Persistence in Environmental and Clinical Settings.

Authors:  Laura A Onyango; Mousa M Alreshidi
Journal:  J Pathog       Date:  2018-09-20

6.  Multiple Novel Traits without Immediate Benefits Originate in Bacteria Evolving on Single Antibiotics.

Authors:  Shraddha Karve; Andreas Wagner
Journal:  Mol Biol Evol       Date:  2022-01-07       Impact factor: 16.240

  6 in total

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