Literature DB >> 24344277

Growth feedback as a basis for persister bistability.

Jingchen Feng1, David A Kessler, Eshel Ben-Jacob, Herbert Levine.   

Abstract

A small fraction of cells in many bacterial populations, called persisters, are much less sensitive to antibiotic treatment than the majority. Persisters are in a dormant metabolic state, even while remaining genetically identical to the actively growing cells. Toxin and antitoxin modules in bacteria are believed to be one possible cause of persistence. A two-gene operon, HipBA, is one of many chromosomally encoded toxin and antitoxin modules in Escherichia coli and the HipA7 allelic variant was the first validated high-persistence mutant. Here, we present a stochastic model that can generate bistability of the HipBA system, via the reciprocal coupling of free HipA to the cellular growth rate. The actively growing state and the dormant state each correspond to a stable state of this model. Fluctuations enable transitions from one to the other. This model is fully in agreement with experimental data obtained with synthetic promoter constructs.

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Year:  2013        PMID: 24344277      PMCID: PMC3890803          DOI: 10.1073/pnas.1320396110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  19 in total

1.  Characterization of the hipA7 allele of Escherichia coli and evidence that high persistence is governed by (p)ppGpp synthesis.

Authors:  Shaleen B Korch; Thomas A Henderson; Thomas M Hill
Journal:  Mol Microbiol       Date:  2003-11       Impact factor: 3.501

2.  Bacterial persistence as a phenotypic switch.

Authors:  Nathalie Q Balaban; Jack Merrin; Remy Chait; Lukasz Kowalik; Stanislas Leibler
Journal:  Science       Date:  2004-08-12       Impact factor: 47.728

3.  Specialized persister cells and the mechanism of multidrug tolerance in Escherichia coli.

Authors:  Iris Keren; Devang Shah; Amy Spoering; Niilo Kaldalu; Kim Lewis
Journal:  J Bacteriol       Date:  2004-12       Impact factor: 3.490

Review 4.  Prokaryotic toxin-antitoxin stress response loci.

Authors:  Kenn Gerdes; Susanne K Christensen; Anders Løbner-Olesen
Journal:  Nat Rev Microbiol       Date:  2005-05       Impact factor: 60.633

5.  Ectopic overexpression of wild-type and mutant hipA genes in Escherichia coli: effects on macromolecular synthesis and persister formation.

Authors:  Shaleen B Korch; Thomas M Hill
Journal:  J Bacteriol       Date:  2006-06       Impact factor: 3.490

6.  Structure and organization of hip, an operon that affects lethality due to inhibition of peptidoglycan or DNA synthesis.

Authors:  D S Black; A J Kelly; M J Mardis; H S Moyed
Journal:  J Bacteriol       Date:  1991-09       Impact factor: 3.490

Review 7.  Toxins-antitoxins: plasmid maintenance, programmed cell death, and cell cycle arrest.

Authors:  Finbarr Hayes
Journal:  Science       Date:  2003-09-12       Impact factor: 47.728

8.  Autoregulation of hip, an operon that affects lethality due to inhibition of peptidoglycan or DNA synthesis.

Authors:  D S Black; B Irwin; H S Moyed
Journal:  J Bacteriol       Date:  1994-07       Impact factor: 3.490

9.  hipA, a newly recognized gene of Escherichia coli K-12 that affects frequency of persistence after inhibition of murein synthesis.

Authors:  H S Moyed; K P Bertrand
Journal:  J Bacteriol       Date:  1983-08       Impact factor: 3.490

10.  Persisters: a distinct physiological state of E. coli.

Authors:  Devang Shah; Zhigang Zhang; Arkady Khodursky; Niilo Kaldalu; Kristi Kurg; Kim Lewis
Journal:  BMC Microbiol       Date:  2006-06-12       Impact factor: 3.605

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  21 in total

1.  Classic reaction kinetics can explain complex patterns of antibiotic action.

Authors:  Pia Abel Zur Wiesch; Sören Abel; Spyridon Gkotzis; Paolo Ocampo; Jan Engelstädter; Trevor Hinkley; Carsten Magnus; Matthew K Waldor; Klas Udekwu; Ted Cohen
Journal:  Sci Transl Med       Date:  2015-05-13       Impact factor: 17.956

Review 2.  Biofilm-related infections: bridging the gap between clinical management and fundamental aspects of recalcitrance toward antibiotics.

Authors:  David Lebeaux; Jean-Marc Ghigo; Christophe Beloin
Journal:  Microbiol Mol Biol Rev       Date:  2014-09       Impact factor: 11.056

3.  Studying Bacterial Persistence: Established Methods and Current Advances.

Authors:  Elen Louwagie; Laure Verstraete; Jan Michiels; Natalie Verstraeten
Journal:  Methods Mol Biol       Date:  2021

4.  Interpreting phenotypic antibiotic tolerance and persister cells as evolution via epigenetic inheritance.

Authors:  Troy Day
Journal:  Mol Ecol       Date:  2016-04-20       Impact factor: 6.185

5.  The Alternative Sigma Factors SigE and SigB Are Involved in Tolerance and Persistence to Antitubercular Drugs.

Authors:  Davide Pisu; Roberta Provvedi; Dulce Mata Espinosa; Jorge Barrios Payan; Francesca Boldrin; Giorgio Palù; Rogelio Hernandez-Pando; Riccardo Manganelli
Journal:  Antimicrob Agents Chemother       Date:  2017-11-22       Impact factor: 5.191

6.  Persistence as an Optimal Hedging Strategy.

Authors:  Alexander P Browning; Jesse A Sharp; Tarunendu Mapder; Christopher M Baker; Kevin Burrage; Matthew J Simpson
Journal:  Biophys J       Date:  2020-11-28       Impact factor: 4.033

7.  Time-kill curve analysis and pharmacodynamic modelling for in vitro evaluation of antimicrobials against Neisseria gonorrhoeae.

Authors:  Sunniva Foerster; Magnus Unemo; Lucy J Hathaway; Nicola Low; Christian L Althaus
Journal:  BMC Microbiol       Date:  2016-09-17       Impact factor: 3.605

8.  Antibiotic resistance: a physicist's view.

Authors:  Rosalind Allen; Bartłomiej Waclaw
Journal:  Phys Biol       Date:  2016-08-11       Impact factor: 2.583

9.  The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence.

Authors:  Yurong Wen; Ester Behiels; Jan Felix; Jonathan Elegheert; Bjorn Vergauwen; Bart Devreese; Savvas N Savvides
Journal:  Nucleic Acids Res       Date:  2014-07-23       Impact factor: 16.971

10.  The Chromosomal parDE2 Toxin-Antitoxin System of Mycobacterium tuberculosis H37Rv: Genetic and Functional Characterization.

Authors:  Manish Gupta; Nishtha Nayyar; Meenakshi Chawla; Ramakrishnan Sitaraman; Rakesh Bhatnagar; Nirupama Banerjee
Journal:  Front Microbiol       Date:  2016-06-14       Impact factor: 5.640

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