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Literature DB >> 26945766

Comparative paleogenomics of crucifers: ancestral genomic blocks revisited.

Martin A Lysak¹, Terezie Mandáková¹, M Eric Schranz².

Abstract

A decade ago the concept of the Ancestral Crucifer Karyotype (ACK) and the definition of 24 conserved genomic blocks was presented. Subsequently, 35 cytogenetic reconstructions and/or draft genome sequences of crucifer species (members of the Brassicaceae family) have been analyzed in the context of this system; placing crucifers at the forefront of plant phylogenomics. In this review, we highlight how the ACK and genomic blocks have facilitated and guided genomic analysis of crucifers in the last 10 years and provide an update of this robust model.

Mesh：

Year: 2016 PMID： 26945766 DOI： 10.1016/j.pbi.2016.02.001

Source DB: PubMed Journal: Curr Opin Plant Biol ISSN： 1369-5266 Impact factor: 7.834

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Cited

32 in total

1. Healthy Roots and Leaves: Comparative Genome Structure of Horseradish and Watercress.

Authors: Terezie Mandáková; Martin A Lysak
Journal: Plant Physiol Date: 2018-11-05 Impact factor: 8.340

2. The makings of higher-order polyploids. A commentary on: 'The story of promiscuous crucifers: origin and genome evolution of an invasive species, Cardamine occulta (Brassicaceae), and its relatives'.

Authors: Michael Chester
Journal: Ann Bot Date: 2019-09-24 Impact factor: 4.357

3. The large genome size variation in the Hesperis clade was shaped by the prevalent proliferation of DNA repeats and rarer genome downsizing.

Authors: Petra Hloušková; Terezie Mandáková; Milan Pouch; Pavel Trávníček; Martin A Lysak
Journal: Ann Bot Date: 2019-08-02 Impact factor: 4.357

4. A chromosome-scale genome assembly of Isatis indigotica, an important medicinal plant used in traditional Chinese medicine : An Isatis genome.

Authors: Minghui Kang; Haolin Wu; Qiao Yang; Li Huang; Quanjun Hu; Tao Ma; Zaiyun Li; Jianquan Liu
Journal: Hortic Res Date: 2020-02-01 Impact factor: 6.793

5. Monophyletic Origin and Evolution of the Largest Crucifer Genomes.

Authors: Terezie Mandáková; Petra Hloušková; Dmitry A German; Martin A Lysak
Journal: Plant Physiol Date: 2017-06-30 Impact factor: 8.340

6. Inter- and intraspecific hypervariability in interstitial telomeric-like repeats (TTTAGGG)n in Anacyclus (Asteraceae).

Authors: Marcela Rosato; Inés Álvarez; Gonzalo Nieto Feliner; Josep A Rosselló
Journal: Ann Bot Date: 2018-08-27 Impact factor: 4.357

Comparative paleogenomics of crucifers: ancestral genomic blocks revisited.

1. Healthy Roots and Leaves: Comparative Genome Structure of Horseradish and Watercress.

2. The makings of higher-order polyploids. A commentary on: 'The story of promiscuous crucifers: origin and genome evolution of an invasive species, Cardamine occulta (Brassicaceae), and its relatives'.

3. The large genome size variation in the Hesperis clade was shaped by the prevalent proliferation of DNA repeats and rarer genome downsizing.

4. A chromosome-scale genome assembly of Isatis indigotica, an important medicinal plant used in traditional Chinese medicine : An Isatis genome.

5. Monophyletic Origin and Evolution of the Largest Crucifer Genomes.

6. Inter- and intraspecific hypervariability in interstitial telomeric-like repeats (TTTAGGG)n in Anacyclus (Asteraceae).

7. Cytomolecular analysis of mutants, breeding lines, and varieties of camelina (Camelina sativa L. Crantz).

8. Genome Evolution in Arabideae Was Marked by Frequent Centromere Repositioning.

9. Chromosome identification for the carnivorous plant Genlisea margaretae.

10. Origin and Evolution of Diploid and Allopolyploid Camelina Genomes Were Accompanied by Chromosome Shattering.