Literature DB >> 33409934

Cytomolecular analysis of mutants, breeding lines, and varieties of camelina (Camelina sativa L. Crantz).

Michał T Kwiatek1, Zofia Drozdowska2, Danuta Kurasiak-Popowska2, Aleksandra Noweiska2, Jerzy Nawracała2.   

Abstract

Camelina sativa L. Crantz (Brassicaceae family), known as camelina, has gained new attention as a re-emerging oil seed crop. With a unique seed oil profile, with the majority of the fatty acids consisting of linolenic (C18:3), oleic (C18:1), linoleic (C18:2), and eicosenoic (C20:1), camelina oil is reported to be useful as a food oil and biofuel. However, there are still many unknown factors about the structure and genetic variability of this crop. Chromosomal localization of ribosomal DNA was performed using fluorescence in situ hybridization (FISH) with 5S rDNA and 25S rDNA sequences as molecular probes on mitotic chromosomes of enzymatically digested root-tip meristematic cells. Here, we present for the first time a comparative analysis of selected genotypes (cultivars, breeding lines and mutants) of C. sativa with the use of cytogenetic techniques. The main aim of the study was to determine the intraspecific and interspecific polymorphisms in the structure of chromosomes of selected accessions using conserved 5S and 25S rDNA repetitive sequences as molecular probes. The results were compared with C. microcarpa (closely related to C. sativa) rDNA gene loci distribution. The presence of minor rDNA sites was discussed and compared with other Brassicaceae species. In addition, demonstration karyograms of C. sativa and C. microcarpa mapped with rDNA probes were prepared based on the cv. "Przybrodzka" and GE2011-02 genotype, respectively. The use of 5S and 25S rDNA probes provided an insight on the genome structure of C. sativa at the cytogenetic level and can help to understand the genome organization of this crop. The putative role of cytogenetic markers in phylogenetic analyses of camelina was discussed, as well.

Entities:  

Keywords:  Camelina sativa; Fluorescence in situ hybridization; Karyogram; Molecular cytogenetics; rDNA gene loci

Year:  2021        PMID: 33409934     DOI: 10.1007/s13353-020-00600-5

Source DB:  PubMed          Journal:  J Appl Genet        ISSN: 1234-1983            Impact factor:   3.240


  28 in total

1.  Chromosomal localization of rDNA in the Brassicaceae.

Authors:  Hoda B M Ali; Martin A Lysak; Ingo Schubert
Journal:  Genome       Date:  2005-04       Impact factor: 2.166

2.  Comparative analysis of rDNA distribution in chromosomes of various species of Brassicaceae.

Authors:  Robert Hasterok; Elzbieta Wolny; Marta Hosiawa; Malgorzata Kowalczyk; Sylwia Kulak-Ksiazczyk; Tomasz Ksiazczyk; Waheeb K Heneen; Jolanta Maluszynska
Journal:  Ann Bot       Date:  2005-12-15       Impact factor: 4.357

3.  Variations in a team: major and minor variants of Arabidopsis thaliana rDNA genes.

Authors:  Mohamed Abou-Ellail; Richard Cooke; Julio Sáez-Vásquez
Journal:  Nucleus       Date:  2011-07-01       Impact factor: 4.197

4.  Sequence organization of the repeating units in the nucleus of wheat which contain 5S rRNA genes.

Authors:  W L Gerlach; T A Dyer
Journal:  Nucleic Acids Res       Date:  1980-11-11       Impact factor: 16.971

5.  A fluorescence in situ hybridization system for karyotyping soybean.

Authors:  Seth D Findley; Steven Cannon; Kranthi Varala; Jianchang Du; Jianxin Ma; Matthew E Hudson; James A Birchler; Gary Stacey
Journal:  Genetics       Date:  2010-04-26       Impact factor: 4.562

6.  Diversity of chromosomal karyotypes in maize and its relatives.

Authors:  P S Albert; Z Gao; T V Danilova; J A Birchler
Journal:  Cytogenet Genome Res       Date:  2010-06-14       Impact factor: 1.636

7.  FISH in analysis of gamma ray-induced micronuclei formation in barley.

Authors:  Jolanta Juchimiuk-Kwasniewska; Lidia Brodziak; Jolanta Maluszynska
Journal:  J Appl Genet       Date:  2010-12-07       Impact factor: 3.240

8.  The emerging biofuel crop Camelina sativa retains a highly undifferentiated hexaploid genome structure.

Authors:  Sateesh Kagale; Chushin Koh; John Nixon; Venkatesh Bollina; Wayne E Clarke; Reetu Tuteja; Charles Spillane; Stephen J Robinson; Matthew G Links; Carling Clarke; Erin E Higgins; Terry Huebert; Andrew G Sharpe; Isobel A P Parkin
Journal:  Nat Commun       Date:  2014-04-23       Impact factor: 14.919

9.  Significant enhancement of fatty acid composition in seeds of the allohexaploid, Camelina sativa, using CRISPR/Cas9 gene editing.

Authors:  Wen Zhi Jiang; Isabelle M Henry; Peter G Lynagh; Luca Comai; Edgar B Cahoon; Donald P Weeks
Journal:  Plant Biotechnol J       Date:  2017-01-12       Impact factor: 9.803

10.  Phenotypic, biochemical and genomic variability in generations of the rapeseed (Brassica napus L.) mutant lines obtained via chemical mutagenesis.

Authors:  Alexandra V Amosova; Svyatoslav A Zoshchuk; Valentina T Volovik; Anna V Shirokova; Nickolai E Horuzhiy; Galina V Mozgova; Olga Yu Yurkevich; Margarita A Artyukhova; Valentina A Lemesh; Tatiana E Samatadze; Olga V Muravenko
Journal:  PLoS One       Date:  2019-08-28       Impact factor: 3.240

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