Literature DB >> 26943623

Multi-year assessment of coastal planktonic fungi reveals environmental drivers of diversity and abundance.

Joe D Taylor1, Michael Cunliffe1,2.   

Abstract

Mycoplankton have so far been a neglected component of pelagic marine ecosystems, having been poorly studied relative to other plankton groups. Currently, there is a lack of understanding of how mycoplankton diversity changes through time, and the identity of controlling environmental drivers. Using Fungi-specific high-throughput sequencing and quantitative PCR analysis of plankton DNA samples collected over 6 years from the coastal biodiversity time series site Station L4 situated off Plymouth (UK), we have assessed changes in the temporal variability of mycoplankton diversity and abundance in relation to co-occurring environmental variables. Mycoplankton diversity at Station L4 was dominated by Ascomycota, Basidiomycota and Chytridiomycota, with several orders within these phyla frequently abundant and dominant in multiple years. Repeating interannual mycoplankton blooms were linked to potential controlling environmental drivers, including nitrogen availability and temperature. Specific relationships between mycoplankton and other plankton groups were also identified, with seasonal chytrid blooms matching diatom blooms in consecutive years. Mycoplankton α-diversity was greatest during periods of reduced salinity at Station L4, indicative of riverine input to the ecosystem. Mycoplankton abundance also increased during periods of reduced salinity, and when potential substrate availability was increased, including particulate organic matter. This study has identified possible controlling environmental drivers of mycoplankton diversity and abundance in a coastal sea ecosystem, and therefore sheds new light on the biology and ecology of an enigmatic marine plankton group. Mycoplankton have several potential functional roles, including saprotrophs and parasites, that should now be considered within the consensus view of pelagic ecosystem functioning and services.

Entities:  

Mesh:

Year:  2016        PMID: 26943623      PMCID: PMC4989315          DOI: 10.1038/ismej.2016.24

Source DB:  PubMed          Journal:  ISME J        ISSN: 1751-7362            Impact factor:   10.302


  37 in total

1.  Automated analysis of nanomolar concentrations of phosphate in natural waters with liquid waveguide.

Authors:  Jia-Zhong Zhang; Jie Chi
Journal:  Environ Sci Technol       Date:  2002-03-01       Impact factor: 9.028

2.  Diversity and biogeochemical function of planktonic fungi in the ocean.

Authors:  Guangyi Wang; Xin Wang; Xianhua Liu; Qian Li
Journal:  Prog Mol Subcell Biol       Date:  2012

Review 3.  Marine fungi: their ecology and molecular diversity.

Authors:  Thomas A Richards; Meredith D M Jones; Guy Leonard; David Bass
Journal:  Ann Rev Mar Sci       Date:  2012

4.  UPARSE: highly accurate OTU sequences from microbial amplicon reads.

Authors:  Robert C Edgar
Journal:  Nat Methods       Date:  2013-08-18       Impact factor: 28.547

5.  Chytrid epidemics may increase genetic diversity of a diatom spring-bloom.

Authors:  Alena S Gsell; Lisette N de Senerpont Domis; Koen J F Verhoeven; Ellen van Donk; Bastiaan W Ibelings
Journal:  ISME J       Date:  2013-05-09       Impact factor: 10.302

6.  Independent terrestrial origins of the Halosphaeriales (marine Ascomycota).

Authors:  J W Spatafora; B Volkmann-Kohlmeyer; J Kohlmeyer
Journal:  Am J Bot       Date:  1998-11       Impact factor: 3.844

Review 7.  Marine microbial community dynamics and their ecological interpretation.

Authors:  Jed A Fuhrman; Jacob A Cram; David M Needham
Journal:  Nat Rev Microbiol       Date:  2015-02-09       Impact factor: 60.633

8.  High fungal diversity and abundance recovered in the deep-sea sediments of the Pacific Ocean.

Authors:  Wei Xu; Ka-Lai Pang; Zhu-Hua Luo
Journal:  Microb Ecol       Date:  2014-07-09       Impact factor: 4.552

9.  Deep sequencing of subseafloor eukaryotic rRNA reveals active Fungi across marine subsurface provinces.

Authors:  William Orsi; Jennifer F Biddle; Virginia Edgcomb
Journal:  PLoS One       Date:  2013-02-13       Impact factor: 3.240

10.  UCHIME improves sensitivity and speed of chimera detection.

Authors:  Robert C Edgar; Brian J Haas; Jose C Clemente; Christopher Quince; Rob Knight
Journal:  Bioinformatics       Date:  2011-06-23       Impact factor: 6.937

View more
  28 in total

1.  Arctic marine fungi: biomass, functional genes, and putative ecological roles.

Authors:  B T Hassett; E J Borrego; T R Vonnahme; T Rämä; M V Kolomiets; R Gradinger
Journal:  ISME J       Date:  2019-02-11       Impact factor: 10.302

2.  Rediscovering Zygorhizidium affluens Canter: Molecular Taxonomy, Infectious Cycle, and Cryopreservation of a Chytrid Infecting the Bloom-Forming Diatom Asterionella formosa.

Authors:  Cecilia Rad-Menéndez; Mélanie Gerphagnon; Andrea Garvetto; Paola Arce; Yacine Badis; Télesphore Sime-Ngando; Claire M M Gachon
Journal:  Appl Environ Microbiol       Date:  2018-11-15       Impact factor: 4.792

3.  Eukaryotic microbes, principally fungi and labyrinthulomycetes, dominate biomass on bathypelagic marine snow.

Authors:  Alexander B Bochdansky; Melissa A Clouse; Gerhard J Herndl
Journal:  ISME J       Date:  2016-09-20       Impact factor: 10.302

4.  Annual Partitioning Patterns of Labyrinthulomycetes Protists Reveal Their Multifaceted Role in Marine Microbial Food Webs.

Authors:  Ningdong Xie; Dana E Hunt; Zackary I Johnson; Yaodong He; Guangyi Wang
Journal:  Appl Environ Microbiol       Date:  2021-01-04       Impact factor: 4.792

5.  Fungal Community Composition and Potential Depth-Related Driving Factors Impacting Distribution Pattern and Trophic Modes from Epi- to Abyssopelagic Zones of the Western Pacific Ocean.

Authors:  Wei Li; Mengmeng Wang; Gaëtan Burgaud; Huaming Yu; Lei Cai
Journal:  Microb Ecol       Date:  2019-04-16       Impact factor: 4.552

6.  Abundant and Rare Taxa of Planktonic Fungal Community Exhibit Distinct Assembly Patterns Along Coastal Eutrophication Gradient.

Authors:  Huaxian Zhao; Francis Q Brearley; Liangliang Huang; Jinli Tang; Qiangsheng Xu; Xiaoli Li; Yuqing Huang; Shuqi Zou; Xing Chen; Weiguo Hou; Lianghao Pan; Ke Dong; Gonglingxia Jiang; Nan Li
Journal:  Microb Ecol       Date:  2022-02-23       Impact factor: 4.552

7.  A High-Resolution Time Series Reveals Distinct Seasonal Patterns of Planktonic Fungi at a Temperate Coastal Ocean Site (Beaufort, North Carolina, USA).

Authors:  Yingbo Duan; Ningdong Xie; Zhiquan Song; Christopher S Ward; Cheuk-Man Yung; Dana E Hunt; Zackary I Johnson; Guangyi Wang
Journal:  Appl Environ Microbiol       Date:  2018-10-17       Impact factor: 4.792

8.  Global Diversity and Biogeography of the Zostera marina Mycobiome.

Authors:  Cassandra L Ettinger; Laura E Vann; Jonathan A Eisen
Journal:  Appl Environ Microbiol       Date:  2021-05-26       Impact factor: 4.792

9.  Low shifts in salinity determined assembly processes and network stability of microeukaryotic plankton communities in a subtropical urban reservoir.

Authors:  Yuanyuan Mo; Feng Peng; Xiaofei Gao; Peng Xiao; Ramiro Logares; Erik Jeppesen; Kexin Ren; Yuanyuan Xue; Jun Yang
Journal:  Microbiome       Date:  2021-06-03       Impact factor: 14.650

Review 10.  Diversity, Ecological Role and Biotechnological Potential of Antarctic Marine Fungi.

Authors:  Stefano Varrella; Giulio Barone; Michael Tangherlini; Eugenio Rastelli; Antonio Dell'Anno; Cinzia Corinaldesi
Journal:  J Fungi (Basel)       Date:  2021-05-17
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.