Literature DB >> 26900088

The Alba protein family: Structure and function.

Manish Goyal1, Chinmoy Banerjee1, Shiladitya Nag1, Uday Bandyopadhyay2.   

Abstract

Alba family proteins are small, basic, dimeric nucleic acid-binding proteins, which are widely distributed in archaea and a number of eukaryotes. This family of proteins bears the distinct features of regulation through acetylation/deacetylation, hence named as acetylation lowers binding affinity (Alba). Alba family proteins bind DNA cooperatively with no apparent sequence specificity. Besides DNA, Alba proteins also interact with diverse RNA species and associate with ribonucleo-protein complexes. Initially, Alba proteins were recognized as chromosomal proteins and supposed to be involved in the maintenance of chromatin architecture and transcription repression. However, recent studies have shown increasing evidence of functional plasticity among Alba family of proteins that widely range from genome packaging and organization, transcriptional and translational regulation, RNA metabolism, and development and differentiation processes. In recent years, Alba family proteins have attracted growing interest due to their widespread occurrence in large number of organisms. Presence in multiple copies, functional crosstalk, differential binding affinity, and posttranslational modifications are some of the key factors that might regulate the biological functions of Alba family proteins. In this review article, we present an overview of the Alba family proteins, their salient features and emphasize their functional role in different organisms reported so far.
Copyright © 2016 Elsevier B.V. All rights reserved.

Keywords:  Acetylation; Alba; Chromatin; Nucleic acid binding; Posttranslational modification; Sir2

Mesh:

Substances:

Year:  2016        PMID: 26900088     DOI: 10.1016/j.bbapap.2016.02.015

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  19 in total

Review 1.  Transcription Regulation in Archaea.

Authors:  Alexandra M Gehring; Julie E Walker; Thomas J Santangelo
Journal:  J Bacteriol       Date:  2016-06-27       Impact factor: 3.490

2.  Deciphering the three-domain architecture in schlafens and the structures and roles of human schlafen12 and serpinB12 in transcriptional regulation.

Authors:  Jiaxing Chen; Leslie A Kuhn
Journal:  J Mol Graph Model       Date:  2019-04-09       Impact factor: 2.518

3.  Phage Display Screening for Alba Superfamily Proteins from the Human Malaria Parasite, Plasmodium falciparum Reveals a High Level of Association with Protein Modification Pathways and Hints at New Drug Targets.

Authors:  Momoko Tajiri
Journal:  Acta Parasitol       Date:  2021-02-08       Impact factor: 1.440

4.  ALBA proteins confer thermotolerance through stabilizing HSF messenger RNAs in cytoplasmic granules.

Authors:  Jinjin Tong; Zhitong Ren; Linhua Sun; Sixian Zhou; Wei Yuan; Yufan Hui; Dong Ci; Wei Wang; Liu-Min Fan; Zhe Wu; Weiqiang Qian
Journal:  Nat Plants       Date:  2022-07-11       Impact factor: 17.352

5.  Searching for G-Quadruplex-Binding Proteins in Plants: New Insight into Possible G-Quadruplex Regulation.

Authors:  Adriana Volná; Martin Bartas; Jakub Nezval; Vladimír Špunda; Petr Pečinka; Jiří Červeň
Journal:  BioTech (Basel)       Date:  2021-09-22

6.  DNA-Binding Properties of a Novel Crenarchaeal Chromatin-Organizing Protein in Sulfolobus acidocaldarius.

Authors:  Liesbeth Lemmens; Kun Wang; Ebert Ruykens; Van Tinh Nguyen; Ann-Christin Lindås; Ronnie Willaert; Mohea Couturier; Eveline Peeters
Journal:  Biomolecules       Date:  2022-03-30

Review 7.  The Role of Cytoplasmic mRNA Cap-Binding Protein Complexes in Trypanosoma brucei and Other Trypanosomatids.

Authors:  Eden R Freire; Nancy R Sturm; David A Campbell; Osvaldo P de Melo Neto
Journal:  Pathogens       Date:  2017-10-27

8.  The complex domain architecture of SAMD9 family proteins, predicted STAND-like NTPases, suggests new links to inflammation and apoptosis.

Authors:  Sergei L Mekhedov; Kira S Makarova; Eugene V Koonin
Journal:  Biol Direct       Date:  2017-05-25       Impact factor: 4.540

Review 9.  Structure and function of archaeal histones.

Authors:  Bram Henneman; Clara van Emmerik; Hugo van Ingen; Remus T Dame
Journal:  PLoS Genet       Date:  2018-09-13       Impact factor: 5.917

Review 10.  Archaea: The Final Frontier of Chromatin.

Authors:  Shawn P Laursen; Samuel Bowerman; Karolin Luger
Journal:  J Mol Biol       Date:  2020-12-29       Impact factor: 5.469

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