Literature DB >> 26892559

Diversification of self-replicating molecules.

Jan W Sadownik1, Elio Mattia1, Piotr Nowak1, Sijbren Otto1.   

Abstract

How new species emerge in nature is still incompletely understood and difficult to study directly. Self-replicating molecules provide a simple model that allows us to capture the fundamental processes that occur in species formation. We have been able to monitor in real time and at a molecular level the diversification of self-replicating molecules into two distinct sets that compete for two different building blocks ('food') and so capture an important aspect of the process by which species may arise. The results show that the second replicator set is a descendant of the first and that both sets are kinetic products that oppose the thermodynamic preference of the system. The sets occupy related but complementary food niches. As diversification into sets takes place on the timescale of weeks and can be investigated at the molecular level, this work opens up new opportunities for experimentally investigating the process through which species arise both in real time and with enhanced detail.

Year:  2016        PMID: 26892559     DOI: 10.1038/nchem.2419

Source DB:  PubMed          Journal:  Nat Chem        ISSN: 1755-4330            Impact factor:   24.427


  32 in total

1.  Dynamic molecular networks: from synthetic receptors to self-replicators.

Authors:  Sijbren Otto
Journal:  Acc Chem Res       Date:  2012-01-20       Impact factor: 22.384

2.  The species concept as an emergent property of population biology.

Authors:  Michael W Hart
Journal:  Evolution       Date:  2010-12-10       Impact factor: 3.694

3.  Integrating replication-based selection strategies in dynamic covalent systems.

Authors:  Vicente del Amo; Douglas Philp
Journal:  Chemistry       Date:  2010-12-03       Impact factor: 5.236

4.  Mechanisms of autocatalysis.

Authors:  Andrew J Bissette; Stephen P Fletcher
Journal:  Angew Chem Int Ed Engl       Date:  2013-10-11       Impact factor: 15.336

Review 5.  Autocatalytic networks: the transition from molecular self-replication to molecular ecosystems.

Authors:  D H Lee; K Severin; M R Ghadiri
Journal:  Curr Opin Chem Biol       Date:  1997-12       Impact factor: 8.822

6.  Controlling the Structure and Length of Self-Synthesizing Supramolecular Polymers through Nucleated Growth and Disassembly.

Authors:  Asish Pal; Morteza Malakoutikhah; Giulia Leonetti; Meniz Tezcan; Mathieu Colomb-Delsuc; Van Duc Nguyen; Jasper van der Gucht; Sijbren Otto
Journal:  Angew Chem Int Ed Engl       Date:  2015-05-27       Impact factor: 15.336

7.  Kinetically controlled phenomena in dynamic combinatorial libraries.

Authors:  Qing Ji; Rio Carlo Lirag; Ognjen Š Miljanić
Journal:  Chem Soc Rev       Date:  2014-03-21       Impact factor: 54.564

8.  The hypercycle. A principle of natural self-organization. Part A: Emergence of the hypercycle.

Authors:  M Eigen; P Schuster
Journal:  Naturwissenschaften       Date:  1977-11

9.  Exponential self-replication enabled through a fibre elongation/breakage mechanism.

Authors:  Mathieu Colomb-Delsuc; Elio Mattia; Jan W Sadownik; Sijbren Otto
Journal:  Nat Commun       Date:  2015-06-17       Impact factor: 14.919

Review 10.  Towards an evolutionary theory of the origin of life based on kinetics and thermodynamics.

Authors:  Robert Pascal; Addy Pross; John D Sutherland
Journal:  Open Biol       Date:  2013-11-06       Impact factor: 6.411

View more
  38 in total

1.  Primitive selection of the fittest emerging through functional synergy in nucleopeptide networks.

Authors:  Anil Kumar Bandela; Nathaniel Wagner; Hava Sadihov; Sara Morales-Reina; Agata Chotera-Ouda; Kingshuk Basu; Rivka Cohen-Luria; Andrés de la Escosura; Gonen Ashkenasy
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-02       Impact factor: 11.205

2.  Control over differentiation of a metastable supramolecular assembly in one and two dimensions.

Authors:  Tomoya Fukui; Shinnosuke Kawai; Satoko Fujinuma; Yoshitaka Matsushita; Takeshi Yasuda; Tsuneaki Sakurai; Shu Seki; Masayuki Takeuchi; Kazunori Sugiyasu
Journal:  Nat Chem       Date:  2016-12-19       Impact factor: 24.427

3.  Cooperative polymerization of α-helices induced by macromolecular architecture.

Authors:  Ryan Baumgartner; Hailin Fu; Ziyuan Song; Yao Lin; Jianjun Cheng
Journal:  Nat Chem       Date:  2017-02-06       Impact factor: 24.427

Review 4.  Exoplanet Biosignatures: Future Directions.

Authors:  Sara I Walker; William Bains; Leroy Cronin; Shiladitya DasSarma; Sebastian Danielache; Shawn Domagal-Goldman; Betul Kacar; Nancy Y Kiang; Adrian Lenardic; Christopher T Reinhard; William Moore; Edward W Schwieterman; Evgenya L Shkolnik; Harrison B Smith
Journal:  Astrobiology       Date:  2018-06       Impact factor: 4.335

5.  Stereochemical plasticity modulates cooperative binding in a CoII12L6 cuboctahedron.

Authors:  Felix J Rizzuto; Jonathan R Nitschke
Journal:  Nat Chem       Date:  2017-04-10       Impact factor: 24.427

6.  Dynamic covalent chemistry enables formation of antimicrobial peptide quaternary assemblies in a completely abiotic manner.

Authors:  James F Reuther; Justine L Dees; Igor V Kolesnichenko; Erik T Hernandez; Dmitri V Ukraintsev; Rusheel Guduru; Marvin Whiteley; Eric V Anslyn
Journal:  Nat Chem       Date:  2017-08-21       Impact factor: 24.427

7.  A Versatile Approach to Noncanonical, Dynamic Covalent Single- and Multi-Loop Peptide Macrocycles for Enhancing Antimicrobial Activity.

Authors:  James F Reuther; Andrew C Goodrich; P Rogelio Escamilla; Tiffany A Lu; Valarie Del Rio; Bryan W Davies; Eric V Anslyn
Journal:  J Am Chem Soc       Date:  2018-03-01       Impact factor: 15.419

Review 8.  Viewpoint: From Responsive to Adaptive and Interactive Materials and Materials Systems: A Roadmap.

Authors:  Andreas Walther
Journal:  Adv Mater       Date:  2019-11-25       Impact factor: 30.849

Review 9.  The rise of intelligent matter.

Authors:  C Kaspar; B J Ravoo; W G van der Wiel; S V Wegner; W H P Pernice
Journal:  Nature       Date:  2021-06-16       Impact factor: 49.962

10.  Dynamic spatial and structural organization in artificial cells regulates signal processing by protein scaffolding.

Authors:  Bastiaan C Buddingh'; Antoni Llopis-Lorente; Loai K E A Abdelmohsen; Jan C M van Hest
Journal:  Chem Sci       Date:  2020-11-05       Impact factor: 9.825

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.