Literature DB >> 29256509

Dynamic covalent chemistry enables formation of antimicrobial peptide quaternary assemblies in a completely abiotic manner.

James F Reuther1, Justine L Dees2, Igor V Kolesnichenko1, Erik T Hernandez1, Dmitri V Ukraintsev1, Rusheel Guduru1, Marvin Whiteley2, Eric V Anslyn1.   

Abstract

Naturally occurring peptides and proteins often use dynamic disulfide bonds to impart defined tertiary/quaternary structures for the formation of binding pockets with uniform size and function. Although peptide synthesis and modification are well established, controlling quaternary structure formation remains a significant challenge. Here, we report the facile incorporation of aryl aldehyde and acyl hydrazide functionalities into peptide oligomers via solid-phase copper-catalysed azide-alkyne cycloaddition (SP-CuAAC) click reactions. When mixed, these complementary functional groups rapidly react in aqueous media at neutral pH to form peptide-peptide intermolecular macrocycles with highly tunable ring sizes. Moreover, sequence-specific figure-of-eight, dumbbell-shaped, zipper-like and multi-loop quaternary structures were formed selectively. Controlling the proportions of reacting peptides with mismatched numbers of complementary reactive groups results in the formation of higher-molecular-weight sequence-defined ladder polymers. This also amplified antimicrobial effectiveness in select cases. This strategy represents a general approach to the creation of complex abiotic peptide quaternary structures.

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Year:  2017        PMID: 29256509     DOI: 10.1038/nchem.2847

Source DB:  PubMed          Journal:  Nat Chem        ISSN: 1755-4330            Impact factor:   24.427


  37 in total

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2.  BIND: the Biomolecular Interaction Network Database.

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Review 5.  The exploration of macrocycles for drug discovery--an underexploited structural class.

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Review 10.  Biosynthetic Polymers as Functional Materials.

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  11 in total

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Journal:  Chem Commun (Camb)       Date:  2020-05-04       Impact factor: 6.222

2.  A Versatile Approach to Noncanonical, Dynamic Covalent Single- and Multi-Loop Peptide Macrocycles for Enhancing Antimicrobial Activity.

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3.  Dynamic Covalent Polymers for Biomedical Applications.

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5.  Studies of Surface Preparation for the Fluorosequencing of Peptides.

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Review 6.  Functional protein nanostructures: a chemical toolbox.

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7.  2,2'-Bipyridine and hydrazide containing peptides for cyclization and complex quaternary structural control.

Authors:  Erik T Hernandez; P Rogelio Escamilla; Sang-Yop Kwon; Jonathan Partridge; Matthew McVeigh; Sebastian Rivera; James F Reuther; Eric V Anslyn
Journal:  New J Chem       Date:  2018-04-11       Impact factor: 3.591

Review 8.  Peptide-based nanomaterials: Self-assembly, properties and applications.

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9.  Efficient syntheses of macrocycles ranging from 22-28 atoms through spontaneous dimerization to yield bis-hydrazones.

Authors:  Vishal R Sharma; Arshad Mehmood; Benjamin G Janesko; Eric E Simanek
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10.  Self-triggered click reaction in an Alzheimer's disease model: in situ bifunctional drug synthesis catalyzed by neurotoxic copper accumulated in amyloid-β plaques.

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Journal:  Chem Sci       Date:  2019-09-27       Impact factor: 9.825

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