Literature DB >> 26870524

Crystal structure of N-(1-acetyl-3-chloro-1H-indazol-6-yl)-4-meth-oxy-benzene-sulfonamide.

Yassine Hakmaoui1, El Mostapha Rakib1, Ahmed Gamouh1, Mohamed Saadi2, Lahcen El Ammari2.   

Abstract

In the title compound, C16H14ClN3O4S, the six-membered ring of the indazole group is connected to a sulfonamide group. The indazole system is essentially planar, with the greatest deviation from the mean plane being 0.007 (2) Å. The dihedral angle between the two six-membered rings is 74.99 (9)°. The crystal structure exhibits inversion dimers in which mol-ecules are linked by pairs of N-H⋯O and C-H⋯O hydrogen bonds.

Entities:  

Keywords:  crystal structure; hydrogen bonding; sulfonamide

Year:  2015        PMID: 26870524      PMCID: PMC4719877          DOI: 10.1107/S2056989015020605

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For biological activities of indazole derivatives, see: Gaikwad et al. (2015 ▸); Jennings & Tennant (2007 ▸). For related derivatives, see: Abbassi et al. (2012 ▸, 2014 ▸); Bouissane et al. (2006 ▸).

Experimental

Crystal data

C16H14ClN3O4S M = 379.81 Monoclinic, a = 13.9664 (6) Å b = 6.4300 (3) Å c = 19.6155 (9) Å β = 107.227 (1)° V = 1682.52 (13) Å3 Z = 4 Mo Kα radiation μ = 0.38 mm−1 T = 296 K 0.31 × 0.27 × 0.21 mm

Data collection

Bruker X8 APEX diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▸) T min = 0.654, T max = 0.747 33806 measured reflections 4461 independent reflections 3423 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.130 S = 1.09 4461 reflections 227 parameters H-atom parameters constrained Δρmax = 0.34 e Å−3 Δρmin = −0.35 e Å−3

Data collection: APEX2 (Bruker, 2009 ▸); cell refinement: SAINT (Bruker, 2009 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015 ▸); molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▸) and ORTEP-3 for Windows (Farrugia, 2012 ▸); software used to prepare material for publication: publCIF (Westrip, 2010 ▸). Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989015020605/tk5402sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015020605/tk5402Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015020605/tk5402Isup3.cml Click here for additional data file. . DOI: 10.1107/S2056989015020605/tk5402fig1.tif Plot of the mol­ecule of the title compound with the atom-labelling scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are represented as small circles. Click here for additional data file. C . DOI: 10.1107/S2056989015020605/tk5402fig2.tif Partial plot of the mol­ecular packing in the title compound, showing inversion dimers of mol­ecules linked through N1—H1⋯O1 (dashed lines) and C15—H15C⋯O2 hydrogen bonds. CCDC reference: 1434410 Additional supporting information: crystallographic information; 3D view; checkCIF report
C16H14ClN3O4SDx = 1.499 Mg m3
Mr = 379.81Melting point: 388 K
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 13.9664 (6) ÅCell parameters from 4461 reflections
b = 6.4300 (3) Åθ = 3.0–29.0°
c = 19.6155 (9) ŵ = 0.38 mm1
β = 107.227 (1)°T = 296 K
V = 1682.52 (13) Å3Block, colourless
Z = 40.31 × 0.27 × 0.21 mm
F(000) = 784
Bruker X8 APEX diffractometer4461 independent reflections
Radiation source: fine-focus sealed tube3423 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.032
φ and ω scansθmax = 29.0°, θmin = 3.0°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −15→19
Tmin = 0.654, Tmax = 0.747k = −8→8
33806 measured reflectionsl = −26→26
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.042H-atom parameters constrained
wR(F2) = 0.130w = 1/[σ2(Fo2) + (0.0695P)2 + 0.2697P] where P = (Fo2 + 2Fc2)/3
S = 1.09(Δ/σ)max = 0.001
4461 reflectionsΔρmax = 0.34 e Å3
227 parametersΔρmin = −0.35 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
C10.91669 (11)0.2704 (2)0.37321 (8)0.0452 (3)
C20.89374 (16)0.1193 (3)0.41556 (10)0.0617 (5)
H20.9006−0.02050.40580.074*
C30.86020 (16)0.1769 (3)0.47309 (10)0.0602 (5)
H30.84480.07550.50200.072*
C40.85003 (11)0.3830 (2)0.48700 (8)0.0408 (3)
C50.87624 (15)0.5333 (3)0.44499 (10)0.0550 (4)
H50.87120.67340.45510.066*
C60.90957 (15)0.4760 (3)0.38864 (10)0.0557 (4)
H60.92740.57730.36080.067*
C70.61586 (12)0.4460 (3)0.47134 (9)0.0473 (4)
C80.53586 (11)0.3118 (3)0.44493 (8)0.0441 (3)
H80.53000.18860.46820.053*
C90.46477 (11)0.3708 (2)0.38180 (8)0.0446 (3)
C100.47468 (13)0.5525 (3)0.34520 (9)0.0516 (4)
C110.55490 (14)0.6856 (3)0.37318 (12)0.0617 (5)
H110.56130.80770.34950.074*
C120.62455 (14)0.6340 (3)0.43640 (11)0.0601 (4)
H120.67790.72340.45640.072*
C130.39023 (14)0.5496 (3)0.28361 (10)0.0573 (4)
C140.32896 (13)0.0995 (3)0.35643 (9)0.0507 (4)
C150.22920 (16)0.0485 (3)0.30602 (11)0.0669 (5)
H15A0.23400.04430.25820.100*
H15B0.18160.15290.30920.100*
H15C0.2076−0.08460.31810.100*
C160.95084 (18)0.0198 (3)0.29354 (11)0.0681 (5)
H16A0.97370.01480.25200.102*
H16B0.9962−0.05720.33150.102*
H16C0.8851−0.04020.28260.102*
N10.68799 (10)0.3907 (3)0.53612 (7)0.0528 (3)
H10.66850.31650.56600.063*
N20.37631 (11)0.2767 (2)0.34114 (7)0.0500 (3)
N30.33132 (12)0.3908 (3)0.27965 (8)0.0582 (4)
O10.37051 (10)−0.0002 (2)0.40987 (7)0.0588 (3)
O20.85332 (9)0.3360 (2)0.61953 (6)0.0641 (4)
O30.81333 (11)0.6802 (2)0.56320 (8)0.0681 (4)
O40.94732 (10)0.2289 (2)0.31491 (7)0.0593 (3)
S10.80653 (3)0.45883 (7)0.55819 (2)0.04892 (14)
Cl10.36508 (5)0.72884 (10)0.21588 (3)0.0859 (2)
U11U22U33U12U13U23
C10.0407 (8)0.0515 (8)0.0423 (8)−0.0026 (6)0.0104 (6)0.0070 (6)
C20.0916 (14)0.0368 (8)0.0669 (11)0.0011 (8)0.0390 (10)0.0044 (7)
C30.0858 (14)0.0418 (8)0.0645 (11)−0.0039 (8)0.0400 (10)0.0088 (7)
C40.0355 (7)0.0432 (7)0.0427 (7)−0.0029 (6)0.0101 (6)0.0004 (6)
C50.0692 (11)0.0384 (8)0.0621 (10)−0.0086 (7)0.0265 (9)0.0016 (7)
C60.0703 (11)0.0455 (8)0.0564 (10)−0.0113 (8)0.0268 (9)0.0078 (7)
C70.0397 (8)0.0540 (9)0.0529 (9)0.0037 (6)0.0209 (7)−0.0007 (7)
C80.0424 (8)0.0491 (8)0.0444 (8)0.0034 (6)0.0183 (6)0.0020 (6)
C90.0413 (8)0.0500 (8)0.0473 (8)0.0052 (6)0.0203 (6)0.0007 (6)
C100.0481 (9)0.0563 (9)0.0561 (9)0.0108 (7)0.0242 (8)0.0105 (7)
C110.0542 (10)0.0554 (10)0.0804 (13)0.0032 (8)0.0271 (9)0.0182 (9)
C120.0471 (9)0.0587 (10)0.0758 (12)−0.0038 (8)0.0202 (9)0.0073 (9)
C130.0558 (10)0.0662 (11)0.0544 (9)0.0142 (8)0.0231 (8)0.0173 (8)
C140.0497 (9)0.0546 (9)0.0463 (8)0.0004 (7)0.0118 (7)−0.0034 (7)
C150.0639 (12)0.0710 (12)0.0545 (10)−0.0106 (9)0.0002 (9)−0.0021 (9)
C160.0777 (13)0.0725 (12)0.0595 (11)0.0117 (10)0.0288 (10)−0.0048 (9)
N10.0420 (7)0.0696 (9)0.0487 (7)−0.0057 (6)0.0165 (6)0.0042 (6)
N20.0498 (7)0.0563 (8)0.0420 (7)0.0026 (6)0.0107 (6)0.0055 (6)
N30.0568 (9)0.0696 (10)0.0468 (8)0.0097 (7)0.0132 (7)0.0115 (7)
O10.0532 (7)0.0599 (7)0.0572 (7)−0.0037 (6)0.0068 (6)0.0094 (6)
O20.0522 (7)0.0939 (10)0.0416 (6)−0.0115 (7)0.0070 (5)0.0031 (6)
O30.0687 (8)0.0608 (8)0.0779 (9)−0.0131 (6)0.0264 (7)−0.0248 (7)
O40.0719 (8)0.0625 (7)0.0502 (7)−0.0038 (6)0.0286 (6)0.0018 (5)
S10.0440 (2)0.0576 (3)0.0458 (2)−0.00842 (17)0.01419 (17)−0.00832 (17)
Cl10.0821 (4)0.0971 (4)0.0790 (4)0.0150 (3)0.0247 (3)0.0444 (3)
C1—O41.361 (2)C11—C121.371 (3)
C1—C61.366 (2)C11—H110.9300
C1—C21.376 (2)C12—H120.9300
C2—C31.394 (3)C13—N31.299 (3)
C2—H20.9300C13—Cl11.7146 (18)
C3—C41.369 (2)C14—O11.219 (2)
C3—H30.9300C14—N21.394 (2)
C4—C51.388 (2)C14—C151.487 (2)
C4—S11.7490 (16)C15—H15A0.9600
C5—C61.371 (3)C15—H15B0.9600
C5—H50.9300C15—H15C0.9600
C6—H60.9300C16—O41.414 (2)
C7—C81.385 (2)C16—H16A0.9600
C7—C121.413 (2)C16—H16B0.9600
C7—N11.413 (2)C16—H16C0.9600
C8—C91.391 (2)N1—S11.6419 (14)
C8—H80.9300N1—H10.8600
C9—N21.395 (2)N2—N31.3924 (19)
C9—C101.399 (2)O2—S11.4257 (14)
C10—C111.388 (3)O3—S11.4279 (14)
C10—C131.417 (3)
O4—C1—C6115.95 (14)C11—C12—H12119.8
O4—C1—C2123.80 (16)C7—C12—H12119.8
C6—C1—C2120.25 (16)N3—C13—C10114.44 (15)
C1—C2—C3119.71 (16)N3—C13—Cl1120.08 (15)
C1—C2—H2120.1C10—C13—Cl1125.44 (15)
C3—C2—H2120.1O1—C14—N2118.65 (15)
C4—C3—C2119.87 (15)O1—C14—C15124.73 (17)
C4—C3—H3120.1N2—C14—C15116.61 (15)
C2—C3—H3120.1C14—C15—H15A109.5
C3—C4—C5119.64 (15)C14—C15—H15B109.5
C3—C4—S1120.68 (12)H15A—C15—H15B109.5
C5—C4—S1119.68 (13)C14—C15—H15C109.5
C6—C5—C4120.27 (16)H15A—C15—H15C109.5
C6—C5—H5119.9H15B—C15—H15C109.5
C4—C5—H5119.9O4—C16—H16A109.5
C1—C6—C5120.20 (15)O4—C16—H16B109.5
C1—C6—H6119.9H16A—C16—H16B109.5
C5—C6—H6119.9O4—C16—H16C109.5
C8—C7—C12121.82 (16)H16A—C16—H16C109.5
C8—C7—N1117.46 (15)H16B—C16—H16C109.5
C12—C7—N1120.70 (16)C7—N1—S1124.38 (12)
C7—C8—C9116.57 (15)C7—N1—H1117.8
C7—C8—H8121.7S1—N1—H1117.8
C9—C8—H8121.7N3—N2—C14119.73 (14)
C8—C9—N2131.97 (15)N3—N2—C9111.28 (14)
C8—C9—C10122.10 (16)C14—N2—C9128.90 (13)
N2—C9—C10105.92 (14)C13—N3—N2104.30 (15)
C11—C10—C9120.21 (16)C1—O4—C16118.88 (14)
C11—C10—C13135.73 (17)O2—S1—O3119.31 (9)
C9—C10—C13104.05 (16)O2—S1—N1104.43 (8)
C12—C11—C10118.81 (17)O3—S1—N1108.98 (9)
C12—C11—H11120.6O2—S1—C4109.79 (8)
C10—C11—H11120.6O3—S1—C4107.52 (8)
C11—C12—C7120.40 (17)N1—S1—C4106.07 (7)
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.862.192.934 (2)144
C15—H15C···O2i0.962.333.251 (3)159
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯O1i 0.862.192.934 (2)144
C15—H15C⋯O2i 0.962.333.251 (3)159

Symmetry code: (i) .

  7 in total

1.  Synthesis and biological evaluation of N-(7-indazolyl)benzenesulfonamide derivatives as potent cell cycle inhibitors.

Authors:  L Bouissane; S El Kazzouli; S Léonce; B Pfeiffer; E M Rakib; M Khouili; G Guillaumet
Journal:  Bioorg Med Chem       Date:  2005-11-07       Impact factor: 3.641

2.  Selection of molecules based on shape and electrostatic similarity: proof of concept of "electroforms".

Authors:  Andy Jennings; Mike Tennant
Journal:  J Chem Inf Model       Date:  2007-09-08       Impact factor: 4.956

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 4.  Synthesis of indazole motifs and their medicinal importance: an overview.

Authors:  Digambar D Gaikwad; Archana D Chapolikar; Chandrashekhar G Devkate; Khandu D Warad; Amit P Tayade; Rajendra P Pawar; Abraham J Domb
Journal:  Eur J Med Chem       Date:  2014-11-21       Impact factor: 6.514

5.  Synthesis and antitumor activity of some substituted indazole derivatives.

Authors:  Najat Abbassi; El Mostapha Rakib; Hakima Chicha; Latifa Bouissane; Abdellah Hannioui; Cinzia Aiello; Rosaria Gangemi; Patrizio Castagnola; Camillo Rosano; Maurizio Viale
Journal:  Arch Pharm (Weinheim)       Date:  2014-02-19       Impact factor: 3.751

6.  Synthesis, antiproliferative and apoptotic activities of N-(6(4)-indazolyl)-benzenesulfonamide derivatives as potential anticancer agents.

Authors:  Najat Abbassi; Hakima Chicha; El Mostapha Rakib; Abdellah Hannioui; Mdaghri Alaoui; Abdelouahed Hajjaji; Detlef Geffken; Cinzia Aiello; Rosaria Gangemi; Camillo Rosano; Maurizio Viale
Journal:  Eur J Med Chem       Date:  2012-09-17       Impact factor: 6.514

7.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

  7 in total

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