Literature DB >> 26857072

Chemical and Biophysical Modulation of Cas9 for Tunable Genome Engineering.

James K Nuñez1, Lucas B Harrington1, Jennifer A Doudna1,2,3.   

Abstract

The application of the CRISPR-Cas9 system for genome engineering has revolutionized the ability to interrogate genomes of mammalian cells. Programming the Cas9 endonuclease to induce DNA breaks at specified sites is achieved by simply modifying the sequence of its cognate guide RNA. Although Cas9-mediated genome editing has been shown to be highly specific, cleavage events at off-target sites have also been reported. Minimizing, and eventually abolishing, unwanted off-target cleavage remains a major goal of the CRISPR-Cas9 technology before its implementation for therapeutic use. Recent efforts have turned to chemical biology and biophysical approaches to engineer inducible genome editing systems for controlling Cas9 activity at the transcriptional and protein levels. Here, we review recent advancements to modulate Cas9-mediated genome editing by engineering split-Cas9 constructs, inteins, small molecules, protein-based dimerizing domains, and light-inducible systems.

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Year:  2016        PMID: 26857072     DOI: 10.1021/acschembio.5b01019

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  41 in total

Review 1.  Repair of a Site-Specific DNA Cleavage: Old-School Lessons for Cas9-Mediated Gene Editing.

Authors:  Danielle N Gallagher; James E Haber
Journal:  ACS Chem Biol       Date:  2017-11-14       Impact factor: 5.100

2.  Evolution of a split RNA polymerase as a versatile biosensor platform.

Authors:  Jinyue Pu; Julia Zinkus-Boltz; Bryan C Dickinson
Journal:  Nat Chem Biol       Date:  2017-02-13       Impact factor: 15.040

3.  Spatiotemporal Control of CRISPR/Cas9 Function in Cells and Zebrafish using Light-Activated Guide RNA.

Authors:  Wenyuan Zhou; Wes Brown; Anirban Bardhan; Michael Delaney; Amber S Ilk; Randy R Rauen; Shoeb I Kahn; Michael Tsang; Alexander Deiters
Journal:  Angew Chem Int Ed Engl       Date:  2020-04-06       Impact factor: 15.336

Review 4.  Allosteric regulation of CRISPR-Cas9 for DNA-targeting and cleavage.

Authors:  Zhicheng Zuo; Jin Liu
Journal:  Curr Opin Struct Biol       Date:  2020-02-18       Impact factor: 6.809

Review 5.  To CRISPR and beyond: the evolution of genome editing in stem cells.

Authors:  Kuang-Yui Chen; Paul S Knoepfler
Journal:  Regen Med       Date:  2016-12-01       Impact factor: 3.806

Review 6.  CRISPR-Cas9: From a bacterial immune system to genome-edited human cells in clinical trials.

Authors:  Leonhard Kick; Marion Kirchner; Sabine Schneider
Journal:  Bioengineered       Date:  2017-03-13       Impact factor: 3.269

7.  Structural basis of CRISPR-SpyCas9 inhibition by an anti-CRISPR protein.

Authors:  Minghui Guo; Sihan Wang; Yuwei Zhu; Shuo Wang; Zhi Xiong; Jianzheng Yang; Zengliang Xu; Zhiwei Huang
Journal:  Nature       Date:  2017-04-27       Impact factor: 49.962

8.  A Singular System with Precise Dosing and Spatiotemporal Control of CRISPR-Cas9.

Authors:  Debasish Manna; Basudeb Maji; Soumyashree A Gangopadhyay; Kurt J Cox; Qingxuan Zhou; Benjamin K Law; Ralph Mazitschek; Amit Choudhary
Journal:  Angew Chem Int Ed Engl       Date:  2019-04-02       Impact factor: 15.336

9.  A High-Throughput Platform to Identify Small-Molecule Inhibitors of CRISPR-Cas9.

Authors:  Basudeb Maji; Soumyashree A Gangopadhyay; Miseon Lee; Mengchao Shi; Peng Wu; Robert Heler; Beverly Mok; Donghyun Lim; Sachini U Siriwardena; Bishwajit Paul; Vlado Dančík; Amedeo Vetere; Michael F Mesleh; Luciano A Marraffini; David R Liu; Paul A Clemons; Bridget K Wagner; Amit Choudhary
Journal:  Cell       Date:  2019-05-02       Impact factor: 41.582

10.  Phosphate Lock Residues of Acidothermus cellulolyticus Cas9 Are Critical to Its Substrate Specificity.

Authors:  Travis H Hand; Anuska Das; Mitchell O Roth; Chardasia L Smith; Uriel L Jean-Baptiste; Hong Li
Journal:  ACS Synth Biol       Date:  2018-12-03       Impact factor: 5.110

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