Literature DB >> 26852413

Rapid addition of unlabeled silent solubility tags to proteins using a new substrate-fused sortase reagent.

Brendan R Amer1,2, Ramsay Macdonald1,2, Alex W Jacobitz1,2, Brandon Liauw1,2, Robert T Clubb3,4,5.   

Abstract

Many proteins can't be studied using solution NMR methods because they have limited solubility. To overcome this problem, recalcitrant proteins can be fused to a more soluble protein that functions as a solubility tag. However, signals arising from the solubility tag hinder data analysis because they increase spectral complexity. We report a new method to rapidly and efficiently add a non-isotopically labeled Small Ubiquitin-like Modifier protein (SUMO) solubility tag to an isotopically labeled protein. The method makes use of a newly developed SUMO-Sortase tagging reagent in which SUMO and the Sortase A (SrtA) enzyme are present within the same polypeptide. The SUMO-Sortase reagent rapidly attaches SUMO to any protein that contains the sequence LPXTG at its C-terminus. It modifies proteins at least 15-times faster than previously described approaches, and does not require active dialysis or centrifugation during the reaction to increase product yields. In addition, silently tagged proteins are readily purified using the well-established SUMO expression and purification system. The utility of the SUMO-Sortase tagging reagent is demonstrated using PhoP and green fluorescent proteins, which are ~90% modified with SUMO at room temperature within four hours. SrtA is widely used as a tool to construct bioconjugates. Significant rate enhancements in these procedures may also be achieved by fusing the sortase enzyme to its nucleophile substrate.

Entities:  

Keywords:  Protein ligation; SUMO; Silent solubility tag; Sortase

Mesh:

Substances:

Year:  2016        PMID: 26852413      PMCID: PMC5110246          DOI: 10.1007/s10858-016-0019-z

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  33 in total

1.  A solubility-enhancement tag (SET) for NMR studies of poorly behaving proteins.

Authors:  P Zhou; A A Lugovskoy; G Wagner
Journal:  J Biomol NMR       Date:  2001-05       Impact factor: 2.835

2.  Intein-based biosynthetic incorporation of unlabeled protein tags into isotopically labeled proteins for NMR studies.

Authors:  Sara Züger; Hideo Iwai
Journal:  Nat Biotechnol       Date:  2005-05-22       Impact factor: 54.908

3.  Synthesis of biologically active peptide nucleic acid-peptide conjugates by sortase-mediated ligation.

Authors:  Stephan Pritz; Yvonne Wolf; Oliver Kraetke; Jana Klose; Michael Bienert; Michael Beyermann
Journal:  J Org Chem       Date:  2007-04-14       Impact factor: 4.354

4.  Attachment of an NMR-invisible solubility enhancement tag using a sortase-mediated protein ligation method.

Authors:  Yoshihiro Kobashigawa; Hiroyuki Kumeta; Kenji Ogura; Fuyuhiko Inagaki
Journal:  J Biomol NMR       Date:  2009-01-13       Impact factor: 2.835

5.  A general strategy for the evolution of bond-forming enzymes using yeast display.

Authors:  Irwin Chen; Brent M Dorr; David R Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-22       Impact factor: 11.205

6.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

7.  Single-step purification of polypeptides expressed in Escherichia coli as fusions with glutathione S-transferase.

Authors:  D B Smith; K S Johnson
Journal:  Gene       Date:  1988-07-15       Impact factor: 3.688

8.  Enzyme-mediated site-specific antibody-protein modification using a ZZ domain as a linker.

Authors:  Takayuki Sakamoto; Shiori Sawamoto; Tsutomu Tanaka; Hideki Fukuda; Akihiko Kondo
Journal:  Bioconjug Chem       Date:  2010-11-11       Impact factor: 4.774

9.  Solution structure of the PhoP DNA-binding domain from Mycobacterium tuberculosis.

Authors:  Ramsay Macdonald; Dibyendu Sarkar; Brendan R Amer; Robert T Clubb
Journal:  J Biomol NMR       Date:  2015-07-25       Impact factor: 2.835

10.  Overcoming the solubility limit with solubility-enhancement tags: successful applications in biomolecular NMR studies.

Authors:  Pei Zhou; Gerhard Wagner
Journal:  J Biomol NMR       Date:  2010-01       Impact factor: 2.835

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  6 in total

1.  Protein Labeling via a Specific Lysine-Isopeptide Bond Using the Pilin Polymerizing Sortase from Corynebacterium diphtheriae.

Authors:  Scott A McConnell; Brendan R Amer; John Muroski; Janine Fu; Chungyu Chang; Rachel R Ogorzalek Loo; Joseph A Loo; Jerzy Osipiuk; Hung Ton-That; Robert T Clubb
Journal:  J Am Chem Soc       Date:  2018-06-28       Impact factor: 15.419

Review 2.  Sortase Transpeptidases: Structural Biology and Catalytic Mechanism.

Authors:  Alex W Jacobitz; Michele D Kattke; Jeff Wereszczynski; Robert T Clubb
Journal:  Adv Protein Chem Struct Biol       Date:  2017-06-05       Impact factor: 3.507

Review 3.  Recent advances in sortase-catalyzed ligation methodology.

Authors:  John M Antos; Matthias C Truttmann; Hidde L Ploegh
Journal:  Curr Opin Struct Biol       Date:  2016-06-16       Impact factor: 6.809

Review 4.  Challenges in the use of sortase and other peptide ligases for site-specific protein modification.

Authors:  Holly E Morgan; W Bruce Turnbull; Michael E Webb
Journal:  Chem Soc Rev       Date:  2022-05-23       Impact factor: 60.615

Review 5.  Broadening the scope of sortagging.

Authors:  Xiaolin Dai; Alexander Böker; Ulrich Glebe
Journal:  RSC Adv       Date:  2019-02-06       Impact factor: 4.036

6.  Crystal Structure of the Streptomyces coelicolor Sortase E1 Transpeptidase Provides Insight into the Binding Mode of the Novel Class E Sorting Signal.

Authors:  Michele D Kattke; Albert H Chan; Andrew Duong; Danielle L Sexton; Michael R Sawaya; Duilio Cascio; Marie A Elliot; Robert T Clubb
Journal:  PLoS One       Date:  2016-12-09       Impact factor: 3.240

  6 in total

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