Literature DB >> 19140010

Attachment of an NMR-invisible solubility enhancement tag using a sortase-mediated protein ligation method.

Yoshihiro Kobashigawa1, Hiroyuki Kumeta, Kenji Ogura, Fuyuhiko Inagaki.   

Abstract

Sample solubility is essential for structural studies of proteins by solution NMR. Attachment of a solubility enhancement tag, such as GB1, MBP and thioredoxin, to a target protein has been used for this purpose. However, signal overlap of the tag with the target protein often made the spectral analysis difficult. Here we report a sortase-mediated protein ligation method to eliminate NMR signals arising from the tag by preparing the isotopically labeled target protein attached with the non-labeled GB1 tag at the C-terminus.

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Year:  2009        PMID: 19140010     DOI: 10.1007/s10858-008-9296-5

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  20 in total

1.  Sortase: the surface protein anchoring transpeptidase and the LPXTG motif.

Authors:  R P Novick
Journal:  Trends Microbiol       Date:  2000-04       Impact factor: 17.079

2.  A solubility-enhancement tag (SET) for NMR studies of poorly behaving proteins.

Authors:  P Zhou; A A Lugovskoy; G Wagner
Journal:  J Biomol NMR       Date:  2001-05       Impact factor: 2.835

3.  Autoregulation of a bacterial sigma factor explored by using segmental isotopic labeling and NMR.

Authors:  Julio A Camarero; Alexander Shekhtman; Elizabeth A Campbell; Mark Chlenov; Tanja M Gruber; Donald A Bryant; Seth A Darst; David Cowburn; Tom W Muir
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-25       Impact factor: 11.205

4.  Intein-based biosynthetic incorporation of unlabeled protein tags into isotopically labeled proteins for NMR studies.

Authors:  Sara Züger; Hideo Iwai
Journal:  Nat Biotechnol       Date:  2005-05-22       Impact factor: 54.908

5.  An efficient method for protein phosphorylation using the artificially introduced of cognate-binding modules into kinases and substrates.

Authors:  Yoshihiro Kobashigawa; Masato Naito; Fuyuhiko Inagaki
Journal:  J Biotechnol       Date:  2007-08-14       Impact factor: 3.307

6.  Solution structure of the ubiquitin-associated domain of human BMSC-UbP and its complex with ubiquitin.

Authors:  Yong-Gang Chang; Ai-Xin Song; Yong-Guang Gao; Yan-Hong Shi; Xiao-Jing Lin; Xue-Tao Cao; Dong-Hai Lin; Hong-Yu Hu
Journal:  Protein Sci       Date:  2006-06       Impact factor: 6.725

7.  NMR structure and mutagenesis of the Fas (APO-1/CD95) death domain.

Authors:  B Huang; M Eberstadt; E T Olejniczak; R P Meadows; S W Fesik
Journal:  Nature       Date:  1996 Dec 19-26       Impact factor: 49.962

8.  Synthesis of adenoviral targeting molecules by intein-mediated protein ligation.

Authors:  O Nyanguile; C Dancik; J Blakemore; K Mulgrew; M Kaleko; S C Stevenson
Journal:  Gene Ther       Date:  2003-08       Impact factor: 5.250

9.  A disease state mutation unfolds the parkin ubiquitin-like domain.

Authors:  Susan S Safadi; Gary S Shaw
Journal:  Biochemistry       Date:  2007-11-16       Impact factor: 3.162

10.  Structural basis for the transforming activity of human cancer-related signaling adaptor protein CRK.

Authors:  Yoshihiro Kobashigawa; Mieko Sakai; Masato Naito; Masashi Yokochi; Hiroyuki Kumeta; Yoshinori Makino; Kenji Ogura; Shinya Tanaka; Fuyuhiko Inagaki
Journal:  Nat Struct Mol Biol       Date:  2007-05-21       Impact factor: 15.369

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  48 in total

1.  Efficient segmental isotope labeling of multi-domain proteins using Sortase A.

Authors:  Lee Freiburger; Miriam Sonntag; Janosch Hennig; Jian Li; Peijian Zou; Michael Sattler
Journal:  J Biomol NMR       Date:  2015-08-30       Impact factor: 2.835

2.  Efficient sortase-mediated N-terminal labeling of TEV protease cleaved recombinant proteins.

Authors:  Kwabena Sarpong; Ron Bose
Journal:  Anal Biochem       Date:  2017-01-11       Impact factor: 3.365

3.  Efficient Sortase-Mediated Ligation Using a Common C-Terminal Fusion Tag.

Authors:  Sierra A Reed; David A Brzovic; Savanna S Takasaki; Kristina V Boyko; John M Antos
Journal:  Bioconjug Chem       Date:  2020-04-23       Impact factor: 4.774

4.  Observing selected domains in multi-domain proteins via sortase-mediated ligation and NMR spectroscopy.

Authors:  Mary Anne Refaei; Al Combs; Douglas J Kojetin; John Cavanagh; Carol Caperelli; Mark Rance; Jennifer Sapitro; Pearl Tsang
Journal:  J Biomol NMR       Date:  2010-12-29       Impact factor: 2.835

5.  The NMR structure of the TC10- and Cdc42-interacting domain of CIP4.

Authors:  Yoshihiro Kobashigawa; Hiroyuki Kumeta; Daisuke Kanoh; Fuyuhiko Inagaki
Journal:  J Biomol NMR       Date:  2009-04-22       Impact factor: 2.835

Review 6.  Recent advances in segmental isotope labeling of proteins: NMR applications to large proteins and glycoproteins.

Authors:  Lenka Skrisovska; Mario Schubert; Frédéric H-T Allain
Journal:  J Biomol NMR       Date:  2009-08-19       Impact factor: 2.835

7.  Noncanonical recognition and UBL loading of distinct E2s by autophagy-essential Atg7.

Authors:  Masaya Yamaguchi; Kazuaki Matoba; Ryoko Sawada; Yuko Fujioka; Hitoshi Nakatogawa; Hayashi Yamamoto; Yoshihiro Kobashigawa; Hisashi Hoshida; Rinji Akada; Yoshinori Ohsumi; Nobuo N Noda; Fuyuhiko Inagaki
Journal:  Nat Struct Mol Biol       Date:  2012-11-11       Impact factor: 15.369

8.  Segmental isotope labeling of proteins for NMR structural study using a protein S tag for higher expression and solubility.

Authors:  Hiroshi Kobayashi; G V T Swapna; Kuen-Phon Wu; Yuliya Afinogenova; Kenith Conover; Binchen Mao; Gaetano T Montelione; Masayori Inouye
Journal:  J Biomol NMR       Date:  2012-03-03       Impact factor: 2.835

9.  Sortase-tag expressed protein ligation: combining protein purification and site-specific bioconjugation into a single step.

Authors:  Robert Warden-Rothman; Ilaria Caturegli; Vladimir Popik; Andrew Tsourkas
Journal:  Anal Chem       Date:  2013-10-28       Impact factor: 6.986

Review 10.  Sortase transpeptidases: insights into mechanism, substrate specificity, and inhibition.

Authors:  Kathleen W Clancy; Jeffrey A Melvin; Dewey G McCafferty
Journal:  Biopolymers       Date:  2010       Impact factor: 2.505

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