Literature DB >> 26834506

Semiparametric Estimation in the Secondary Analysis of Case-Control Studies.

Yanyuan Ma1, Raymond J Carroll1.   

Abstract

We study the regression relationship among covariates in case-control data, an area known as the secondary analysis of case-control studies. The context is such that only the form of the regression mean is specified, so that we allow an arbitrary regression error distribution, which can depend on the covariates and thus can be heteroscedastic. Under mild regularity conditions we establish the theoretical identifiability of such models. Previous work in this context has either (a) specified a fully parametric distribution for the regression errors, (b) specified a homoscedastic distribution for the regression errors, (c) has specified the rate of disease in the population (we refer this as true population), or (d) has made a rare disease approximation. We construct a class of semiparametric estimation procedures that rely on none of these. The estimators differ from the usual semiparametric ones in that they draw conclusions about the true population, while technically operating in a hypothetic superpopulation. We also construct estimators with a unique feature, in that they are robust against the misspecification of the regression error distribution in terms of variance structure, while all other nonparametric effects are estimated despite of the biased samples. We establish the asymptotic properties of the estimators and illustrate their finite sample performance through simulation studies, as well as through an empirical example on the relation between red meat consumption and heterocyclic amines. Our analysis verified the positive relationship between red meat consumption and two forms of HCA, indicating that increased red meat consumption leads to increased levels of MeIQA and PhiP, both being risk factors for colorectal cancer. Computer software as well as data to illustrate the methodology are available at http://wileyonlinelibrary.com/journal/rss-datasets.

Entities:  

Keywords:  Biased samples; Case-control study; Heteroscedastic regression; Secondary analysis; Semiparametric estimation

Year:  2015        PMID: 26834506      PMCID: PMC4731052          DOI: 10.1111/rssb.12107

Source DB:  PubMed          Journal:  J R Stat Soc Series B Stat Methodol        ISSN: 1369-7412            Impact factor:   4.488


  12 in total

1.  Haplotype-based regression analysis and inference of case-control studies with unphased genotypes and measurement errors in environmental exposures.

Authors:  Iryna Lobach; Raymond J Carroll; Christine Spinka; Mitchell H Gail; Nilanjan Chatterjee
Journal:  Biometrics       Date:  2007-11-12       Impact factor: 2.571

2.  Retrospective analysis of haplotype-based case control studies under a flexible model for gene environment association.

Authors:  Yi-Hau Chen; Nilanjan Chatterjee; Raymond J Carroll
Journal:  Biostatistics       Date:  2007-05-08       Impact factor: 5.899

3.  EFFICIENT ESTIMATION IN SUFFICIENT DIMENSION REDUCTION.

Authors:  Yanyuan Ma; Liping Zhu
Journal:  Ann Stat       Date:  2013-02       Impact factor: 4.028

4.  A Semiparametric Approach to Dimension Reduction.

Authors:  Yanyuan Ma; Liping Zhu
Journal:  J Am Stat Assoc       Date:  2012       Impact factor: 5.033

5.  Investigation of interaction between N-acetyltransferase 2 and heterocyclic amines as potential risk factors for colorectal cancer.

Authors:  J H Barrett; G Smith; R Waxman; N Gooderham; T Lightfoot; R C Garner; K Augustsson; C R Wolf; D T Bishop; D Forman
Journal:  Carcinogenesis       Date:  2003-02       Impact factor: 4.944

6.  Meat intake, heterocyclic amines, and risk of breast cancer: a case-control study in Uruguay.

Authors:  E De Stefani; A Ronco; M Mendilaharsu; M Guidobono; H Deneo-Pellegrini
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  1997-08       Impact factor: 4.254

7.  Proper analysis of secondary phenotype data in case-control association studies.

Authors:  D Y Lin; D Zeng
Journal:  Genet Epidemiol       Date:  2009-04       Impact factor: 2.135

8.  Incidence and recurrence rates of colorectal adenomas estimated by annually repeated colonoscopies on asymptomatic Japanese.

Authors:  Y Yamaji; T Mitsushima; H Ikuma; H Watabe; M Okamoto; T Kawabe; R Wada; H Doi; M Omata
Journal:  Gut       Date:  2004-04       Impact factor: 23.059

9.  Shrinkage Estimators for Robust and Efficient Inference in Haplotype-Based Case-Control Studies.

Authors:  Yi-Hau Chen; Nilanjan Chatterjee; Raymond J Carroll
Journal:  J Am Stat Assoc       Date:  2009-03-01       Impact factor: 5.033

10.  Robust estimation for homoscedastic regression in the secondary analysis of case-control data.

Authors:  Jiawei Wei; Raymond J Carroll; Ursula U Müller; Ingrid Van Keilegom; Nilanjan Chatterjee
Journal:  J R Stat Soc Series B Stat Methodol       Date:  2013-01-01       Impact factor: 4.488

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  7 in total

1.  Regression analysis for secondary response variable in a case-cohort study.

Authors:  Yinghao Pan; Jianwen Cai; Sangmi Kim; Haibo Zhou
Journal:  Biometrics       Date:  2017-12-29       Impact factor: 2.571

2.  Secondary outcome analysis for data from an outcome-dependent sampling design.

Authors:  Yinghao Pan; Jianwen Cai; Matthew P Longnecker; Haibo Zhou
Journal:  Stat Med       Date:  2018-04-22       Impact factor: 2.373

3.  An alternative robust estimator of average treatment effect in causal inference.

Authors:  Jianxuan Liu; Yanyuan Ma; Lan Wang
Journal:  Biometrics       Date:  2018-02-13       Impact factor: 2.571

4.  CONTROL FUNCTION ASSISTED IPW ESTIMATION WITH A SECONDARY OUTCOME IN CASE-CONTROL STUDIES.

Authors:  Tamar Sofer; Marilyn C Cornelis; Peter Kraft; Eric J Tchetgen Tchetgen
Journal:  Stat Sin       Date:  2017-04       Impact factor: 1.261

5.  A novel association test for multiple secondary phenotypes from a case-control GWAS.

Authors:  Debashree Ray; Saonli Basu
Journal:  Genet Epidemiol       Date:  2017-04-10       Impact factor: 2.135

6.  Semiparametrically efficient estimation in quantile regression of secondary analysis.

Authors:  Liang Liang; Yanyuan Ma; Ying Wei; Raymond J Carroll
Journal:  J R Stat Soc Series B Stat Methodol       Date:  2018-04-14       Impact factor: 4.488

7.  Dimension reduction and estimation in the secondary analysis of case-control studies.

Authors:  Liang Liang; Raymond Carroll; Yanyuan Ma
Journal:  Electron J Stat       Date:  2018-06-12       Impact factor: 1.125

  7 in total

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