Literature DB >> 30100949

Dimension reduction and estimation in the secondary analysis of case-control studies.

Liang Liang1, Raymond Carroll2, Yanyuan Ma3.   

Abstract

Studying the relationship between covariates based on retrospective data is the main purpose of secondary analysis, an area of increasing interest. We examine the secondary analysis problem when multiple covariates are available, while only a regression mean model is specified. Despite the completely parametric modeling of the regression mean function, the case-control nature of the data requires special treatment and semi-parametric efficient estimation generates various nonparametric estimation problems with multivariate covariates. We devise a dimension reduction approach that fits with the specified primary and secondary models in the original problem setting, and use reweighting to adjust for the case-control nature of the data, even when the disease rate in the source population is unknown. The resulting estimator is both locally efficient and robust against the misspecification of the regression error distribution, which can be heteroscedastic as well as non-Gaussian. We demonstrate the advantage of our method over several existing methods, both analytically and numerically.

Entities:  

Keywords:  Biased samples; case-control study; dimension reduction; heteroscedastic error; secondary analysis; semiparametric estimation

Year:  2018        PMID: 30100949      PMCID: PMC6086603          DOI: 10.1214/18-EJS1446

Source DB:  PubMed          Journal:  Electron J Stat        ISSN: 1935-7524            Impact factor:   1.125


  16 in total

1.  Secondary analysis of case-control data.

Authors:  Yannan Jiang; Alastair J Scott; Chris J Wild
Journal:  Stat Med       Date:  2006-04-30       Impact factor: 2.373

2.  Retrospective analysis of haplotype-based case control studies under a flexible model for gene environment association.

Authors:  Yi-Hau Chen; Nilanjan Chatterjee; Raymond J Carroll
Journal:  Biostatistics       Date:  2007-05-08       Impact factor: 5.899

3.  A general regression framework for a secondary outcome in case-control studies.

Authors:  Eric J Tchetgen Tchetgen
Journal:  Biostatistics       Date:  2013-10-22       Impact factor: 5.899

4.  Analysis of Case-Control Association Studies: SNPs, Imputation and Haplotypes.

Authors:  Nilanjan Chatterjee; Yi-Hau Chen; Sheng Luo; Raymond J Carroll
Journal:  Stat Sci       Date:  2009-11-01       Impact factor: 2.901

5.  Non-hierarchical logistic models and case-only designs for assessing susceptibility in population-based case-control studies.

Authors:  W W Piegorsch; C R Weinberg; J A Taylor
Journal:  Stat Med       Date:  1994-01-30       Impact factor: 2.373

6.  Using cases to strengthen inference on the association between single nucleotide polymorphisms and a secondary phenotype in genome-wide association studies.

Authors:  Huilin Li; Mitchell H Gail; Sonja Berndt; Nilanjan Chatterjee
Journal:  Genet Epidemiol       Date:  2010-07       Impact factor: 2.135

7.  Efficiency Loss Caused by Linearity Condition in Dimension Reduction.

Authors:  Ma Yanyuan; Zhu Liping
Journal:  Biometrika       Date:  2013-06       Impact factor: 2.445

8.  A Semiparametric Approach to Dimension Reduction.

Authors:  Yanyuan Ma; Liping Zhu
Journal:  J Am Stat Assoc       Date:  2012       Impact factor: 5.033

9.  Variance Function Partially Linear Single-Index Models1.

Authors:  Heng Lian; Hua Liang; Raymond J Carroll
Journal:  J R Stat Soc Series B Stat Methodol       Date:  2015-01-01       Impact factor: 4.488

10.  Shrinkage Estimators for Robust and Efficient Inference in Haplotype-Based Case-Control Studies.

Authors:  Yi-Hau Chen; Nilanjan Chatterjee; Raymond J Carroll
Journal:  J Am Stat Assoc       Date:  2009-03-01       Impact factor: 5.033

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