Literature DB >> 26828269

The solution structure of the kallikrein-related peptidases inhibitor SPINK6.

Sascha Jung1, Jan Fischer2, Björn Spudy1, Tim Kerkow1, Frank D Sönnichsen3, Li Xue4, Alexandre M J J Bonvin4, Peter Goettig5, Viktor Magdolen6, Ulf Meyer-Hoffert2, Joachim Grötzinger7.   

Abstract

Kallikrein-related peptidases (KLKs) are crucial for epidermal barrier function and are involved in the proteolytic regulation of the desquamation process. Elevated KLK levels were reported in atopic dermatitis. In skin, the proteolytic activity of KLKs is regulated by specific inhibitors of the serine protease inhibitor of Kazal-type (SPINK) family. SPINK6 was shown to be expressed in human stratum corneum and is able to inhibit several KLKs such as KLK4, -5, -12, -13 and -14. In order to understand the structural traits of the specific inhibition we solved the structure of SPINK6 in solution by NMR-spectroscopy and studied its interaction with KLKs. Thereby, beside the conserved binding mode, we identified an alternate binding mode which has so far not been observed for SPINK inhibitors.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  KLK4; Kallikrein-related peptidase 4; Model protease – inhibitor complex; Nuclear magnetic resonance; SPINK6; Structure

Mesh:

Substances:

Year:  2016        PMID: 26828269      PMCID: PMC5553623          DOI: 10.1016/j.bbrc.2016.01.172

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  27 in total

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Authors:  Bruce A Johnson
Journal:  Methods Mol Biol       Date:  2004

3.  Automated NMR structure calculation with CYANA.

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4.  Organization and expression of the rat kallikrein gene family.

Authors:  D R Wines; J M Brady; D B Pritchett; J L Roberts; R J MacDonald
Journal:  J Biol Chem       Date:  1989-05-05       Impact factor: 5.157

5.  Protein backbone angle restraints from searching a database for chemical shift and sequence homology.

Authors:  G Cornilescu; F Delaglio; A Bax
Journal:  J Biomol NMR       Date:  1999-03       Impact factor: 2.835

6.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

7.  Isolation of SPINK6 in human skin: selective inhibitor of kallikrein-related peptidases.

Authors:  Ulf Meyer-Hoffert; Zhihong Wu; Tomasz Kantyka; Jan Fischer; Ties Latendorf; Britta Hansmann; Joachim Bartels; Yinghong He; Regine Gläser; Jens-Michael Schröder
Journal:  J Biol Chem       Date:  2010-07-28       Impact factor: 5.157

8.  Expression and localization of tissue kallikrein mRNAs in human epidermis and appendages.

Authors:  Nahoko Komatsu; Minoru Takata; Norio Otsuki; Tadashi Toyama; Rie Ohka; Kazuhiko Takehara; Kiyofumi Saijoh
Journal:  J Invest Dermatol       Date:  2003-09       Impact factor: 8.551

9.  Elafin is specifically inactivated by RgpB from Porphyromonas gingivalis by distinct proteolytic cleavage.

Authors:  Tomasz Kantyka; Ties Latendorf; Oliver Wiedow; Joachim Bartels; Regine Gläser; Grzegorz Dubin; Jens-Michael Schröder; Jan Potempa; Ulf Meyer-Hoffert
Journal:  Biol Chem       Date:  2009-12       Impact factor: 3.915

10.  HomPPI: a class of sequence homology based protein-protein interface prediction methods.

Authors:  Li C Xue; Drena Dobbs; Vasant Honavar
Journal:  BMC Bioinformatics       Date:  2011-06-17       Impact factor: 3.169

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  2 in total

1.  Template-based protein-protein docking exploiting pairwise interfacial residue restraints.

Authors:  Li C Xue; João P G L M Rodrigues; Drena Dobbs; Vasant Honavar; Alexandre M J J Bonvin
Journal:  Brief Bioinform       Date:  2017-05-01       Impact factor: 11.622

Review 2.  SPINKs in Tumors: Potential Therapeutic Targets.

Authors:  Chengcheng Liao; Qian Wang; Jiaxing An; Minglin Zhang; Jie Chen; Xiaolan Li; Linlin Xiao; Jiajia Wang; Qian Long; Jianguo Liu; Xiaoyan Guan
Journal:  Front Oncol       Date:  2022-02-11       Impact factor: 6.244

  2 in total

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