Literature DB >> 26810265

Identification of new SUMO activating enzyme 1 inhibitors using virtual screening and scaffold hopping.

Ashutosh Kumar1, Akihiro Ito2, Mikako Hirohama3, Minoru Yoshida4, Kam Y J Zhang5.   

Abstract

Sumoylation involves the enzymatic conjugation of small ubiquitin-like modifier (SUMO) protein to their substrate proteins. Sumoylation is not only crucial for maintaining normal cellular physiology but also implicated in the development of several diseases including cancer. SUMO E1, the first protein in sumoylation pathway is of particular significance due to its confirmed role in tumorogenesis. However, notwithstanding its role as potential drug target, only a few small molecule inhibitors of SUMO E1 have been identified. Here, we report the identification of pyrazole and thiazole urea containing compounds as inhibitors of SUMO E1. We have utilized 3D-shape matching, electrostatic potential similarity evaluations and molecular docking to scaffold hop from previously known aryl urea scaffold with SUMO E1 activity to thiazole and pyrazole urea based scaffolds. These two classes of compounds were found to have moderate SUMO E1 inhibitory activity and can be used as starting points for the development of highly potent lead compounds against cancer.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  SUMO; SUMO E1 inhibitor; Scaffold hopping; Sumoylation; Virtual screening

Mesh:

Substances:

Year:  2016        PMID: 26810265     DOI: 10.1016/j.bmcl.2016.01.030

Source DB:  PubMed          Journal:  Bioorg Med Chem Lett        ISSN: 0960-894X            Impact factor:   2.823


  12 in total

1.  Shape similarity guided pose prediction: lessons from D3R Grand Challenge 3.

Authors:  Ashutosh Kumar; Kam Y J Zhang
Journal:  J Comput Aided Mol Des       Date:  2018-08-06       Impact factor: 3.686

2.  Prospective evaluation of shape similarity based pose prediction method in D3R Grand Challenge 2015.

Authors:  Ashutosh Kumar; Kam Y J Zhang
Journal:  J Comput Aided Mol Des       Date:  2016-08-02       Impact factor: 3.686

Review 3.  Ubiquitin and Ubiquitin-like Proteins in Cancer, Neurodegenerative Disorders, and Heart Diseases.

Authors:  Jin-Taek Hwang; Ahyoung Lee; Changwon Kho
Journal:  Int J Mol Sci       Date:  2022-05-02       Impact factor: 6.208

Review 4.  Ubiquitination Regulators Discovered by Virtual Screening for the Treatment of Cancer.

Authors:  Ying-Qi Song; Chun Wu; Ke-Jia Wu; Quan-Bin Han; Xiang-Min Miao; Dik-Lung Ma; Chung-Hang Leung
Journal:  Front Cell Dev Biol       Date:  2021-05-12

Review 5.  Strategies to Inhibit Myc and Their Clinical Applicability.

Authors:  Jonathan R Whitfield; Marie-Eve Beaulieu; Laura Soucek
Journal:  Front Cell Dev Biol       Date:  2017-02-23

6.  Investigations of Structural Requirements for BRD4 Inhibitors through Ligand- and Structure-Based 3D QSAR Approaches.

Authors:  Adeena Tahir; Rima D Alharthy; Saadia Naseem; Natasha Mahmood; Mahmood Ahmed; Khuram Shahzad; Malik Nadeem Akhtar; Abdul Hameed; Irfan Sadiq; Haq Nawaz; Muhammad Muddassar
Journal:  Molecules       Date:  2018-06-25       Impact factor: 4.411

Review 7.  Advances in the Development of Shape Similarity Methods and Their Application in Drug Discovery.

Authors:  Ashutosh Kumar; Kam Y J Zhang
Journal:  Front Chem       Date:  2018-07-25       Impact factor: 5.221

Review 8.  Current Status of SUMOylation Inhibitors.

Authors:  Christopher M Brackett; Brian S J Blagg
Journal:  Curr Med Chem       Date:  2021       Impact factor: 4.530

9.  SUMO targets the APC/C to regulate transition from metaphase to anaphase.

Authors:  Karolin Eifler; Sabine A G Cuijpers; Edwin Willemstein; Jonne A Raaijmakers; Dris El Atmioui; Huib Ovaa; René H Medema; Alfred C O Vertegaal
Journal:  Nat Commun       Date:  2018-03-16       Impact factor: 14.919

Review 10.  Pyrazolyl-Ureas as Interesting Scaffold in Medicinal Chemistry.

Authors:  Chiara Brullo; Federica Rapetti; Olga Bruno
Journal:  Molecules       Date:  2020-07-29       Impact factor: 4.411

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