| Literature DB >> 26793972 |
Anna-Sofie Stensgaard1, Penelope Vounatsou2,3, Ambrose W Onapa4, Jürg Utzinger2,3, Erling M Pedersen5, Thomas K Kristensen5, Paul E Simonsen5.
Abstract
BACKGROUND: Mansonella perstans is a widespread, but relatively unknown human filarial parasite transmitted by Culicoides biting midges. Although it is found in many parts of sub-Saharan Africa, only few studies have been carried out to deepen the understanding of its ecology, epidemiology, and health consequences. Hence, knowledge about ecological drivers of the vector and parasite distribution, integral to develop spatially explicit models for disease prevention, control, and elimination strategies, is limited.Entities:
Mesh:
Year: 2016 PMID: 26793972 PMCID: PMC4721671 DOI: 10.1371/journal.pntd.0004319
Source DB: PubMed Journal: PLoS Negl Trop Dis ISSN: 1935-2727
Overview, sources, and resolution of remotely sensed and other geographic information system data used for modeling.
| Data type | Description | Resolution spatial (period) | Source |
|---|---|---|---|
| Day-time LST | Land surface temperatures | 1 x 1 km (2001–2003) | MODIS Terra |
| Night-time LST | Land surface temperatures | 1 x 1km (2001–2003) | MODIS Terra |
| NDVI | Normalized difference vegetation index | 500 x 500 m (2001–2003) | MODIS Terra |
| Land cover | Land cover classes | 1 x 1km (2002) | MODIS Terra |
| Altitude | Digital elevation model derived | 1 x 1 km | Shuttle Radar Topography SRTM |
| Gridded livestock of the world (GLW2.01) | Livestock densities (head/km2) | 1 x 1 km | FAO//GEONETWORK |
1 Moderate Resolution Imaging Spectroradiometer (MODIS); available at: https://lpdaac.usgs.gov/dataset_discovery/modis/modis_products_table (accessed: 1 October 2014).
2 Shuttle Radar Topography Mission (SRTM); available at: ftp://edcsgs9.cr.usgs.gov (accessed: 1 October 2014
3 Food and Agricultural Organization (FAO) livestock density products at GEONET; available at: http://www.fao.org/geonetwork/srv/en/main.home (accessed: 1 February 2015).
Fig 1School survey locations and observed prevalence of M. perstans microfilaremia in Uganda.
Fig 2Observed proportional distribution of mono- and co-infections (yellow) with M. perstans (green) and W. bancrofti filariasis (red).
Data from 11,606 pupils aged 5–19 years in 76 schools in Uganda (2000–2003).
Parameter estimates based on bivariate logistic regression models for M. perstans microfilaremia in school-aged children in Uganda (2000–2003).
| Data source | Covariate | |||
|---|---|---|---|---|
| OR | 95% CI | |||
| Age (5–9 years) | 1.00 | |||
| | 1.57 | 1.26, 1.96 | ||
| | 2.48 | 1.77, 3.47 | <0.001 | |
| Sex (female) | 1.00 | |||
| | 0.96 | 0.81, 1.14 | 0.660 | |
| Season (dry) | 1.00 | |||
| | 1.52 | 0.39, 5.87 | 0.546 | |
| Land surface temperature (LST) | ||||
| | 0.79 | 0.66, 0.93 | 0.005 (3,699) | |
| | 0.79 | 0.66, 0.93 | 0.005 (3,699) | |
| | 0.78 | 0.65, 0.91 | 0.003 (3,698) | |
| | 1.09 | 0.85, 1.40 | 0.498 (3,706) | |
| | 1.12 | 0.82, 1.52 | 0.473 (3,706) | |
| | 1.10 | 0.81, 1.45 | 0.521 (3,707) | |
| | 0.63 | 0.51, 0.78 | <0.001 (3,688) | |
| | 0.65 | 0.53, 0.79 | <0.001 (3,689) | |
| | 0.63 | 0.51, 0.77 | <0.001 (3,687) | |
| Normalized difference vegetation index (NDVI) | ||||
| | 1.16 | 1.09, 1.23 | <0.001 (3,683) | |
| | 1.15 | 1.08, 1.21 | <0.001 (3,684) | |
| | 1.15 | 1.08, 1.22 | <0.001 (3,684) | |
| Land cover (%) | ||||
| | 1.06 | 1.02, 1.10 | 0.005 (3,697) | |
| | 0.97 | 0.95, 0.99 | 0.019 (3,709) | |
| | 0.98 | 0.95, 1.03 | 0.201 (3,715) | |
| Altitude | 0.99 | 0.99, 1.00 | 0.013 | |
| Livestock | ||||
| | 1.04 | 1.02, 1.06 | <0.001 | |
| | 1.07 | 0.99, 1.16 | 0.105 | |
| | 0.99 | 0.98, 1.01 | 0.523 | |
| | 1.02 | 0.96, 1.07 | 0.593 | |
| | 1.00 | 0.99, 1.00 | 0.673 | |
*Chosen for further multivariate modeling. Models include a school-level random effect to account for clustering at school level.
aOR, odds ratios
bCI, 95% confidence interval
cAIC, Akaike information criterion.
Factors associated with M. perstans microfilaremia in Ugandan school-aged children based on non-spatial and spatial logistic multivariate regression modeling of national survey data (2000–2003).
| Model parameter | Non-spatial(no random effect) | Non-spatial(exchangeable random effect) | Spatial model | |
|---|---|---|---|---|
| Model A | Model B | Model C | ||
| OR | OR (95% BCI) | OR (95% BCI) | ||
| 5–9 | 1.00 | 1.00 | 1.00 | |
| 10–14 | 1.53 (1.24, 1.91) | 1.59 (1.27, 1.96) | 1.59 (1.27, 1.97) | |
| 15–19 | 3.04 (2.23, 4.15) | 2.58 (1.81, 3.54) | 2.56 (1.80, 3.57) | |
| 0.99 (0.99, 1.00) | 1.00 (0.99, 1.00) | 1.00 (0.99, 1.00) | ||
| Diurnal range (wet season) | 1.23 (1.16, 1.28) | 0.72 (0.52, 0.95) | 0.72 (0.50, 0.94) | |
| Wet season | 1.72 (1.66, 1.78) | 1.07 (1.01, 1.16) | 1.08 (1.02, 1.16) | |
| 0.88 (0.87, 0.90) | 0.98 (0.93, 1.04) | 0.98 (0.93, 1.03) | ||
| Cattle/km2 | 1.05 (1.04, 1.06) | 1.04 (1.03, 1.06) | 1.03 (1.01, 1.05) | |
| σ2 (random effect variance) | - | 3.46 (2.00, 5.72) | 3.65 (1.98, 6.71) | |
| ρ (rate of spatial correlation decay) | - | - | 44.3 (1.49, 161.1) | |
| 4,991 | 3,543 | 3,389 | ||
aOR, odds ratios
bBCI, Bayesian credible interval
cDIC, deviance information criterion.
Fig 3Geostatistical model-based predicted mean prevalence of Mansonella perstans in school-aged children in Uganda.
Smooth map of the predicted mean prevalence of M. perstans (a), and the corresponding map of the standard deviations of the predictions (b), highlighting areas of high/low uncertainty associated with the model predictions.
Fig 4Maps of the predicted geographic co-distribution of M. perstans and W. bancroftibased on A) a 10% prevalence threshold, and B) a 5% prevalence threshold.
The predicted areas are based on surveys of Ugandan school-aged children in 2000–2003 and Bayesian geostatistical model predictions of each (single) parasite infection. Predicted areas of high risk malaria (Plasmodium spp. infection prevalence >50%) is shown in hatch as an overlay.
Parasite-parasite associations as assessed by multivariate logistic regression models based on a national survey conducted in Uganda (2000–2003).
| Outcome variable | Covariate | OR (95% CI) | P-value | Adjusted OR | |
|---|---|---|---|---|---|
| 1.01 (0.81, 1.31) | 0.983 | 1.19 (0.98, 1.35) | 0.531 | ||
| 0.84 (0.62, 1.02) | 0.086 | 0.92 (0.72, 1.10) | 0.332 | ||
| 1.03 (0.85, 1.21) | 0.815 | 1.14 (0.91, 1.38) | 0.524 | ||
| 0.89 (0.63, 1.09) | 0.092 | 0.90 (0.70, 1.19) | 0.245 |
Statistically significant (p <0.05) odds ratios are highlighted in bold. OR, odds ratio; CI, confidence interval.
*Adjusted for age groups and sex.