Literature DB >> 26787545

Pelagibacterium lixinzhangensis sp. nov., a Novel Member of the Genus Pelagibacterium.

Na Yang1, Chaomin Sun2.   

Abstract

A Gram-negative, rod shaped and non-spore-forming bacterium, strain H642(T), was isolated from a desert sample collected from Xinjiang province of China, and subjected to a polyphasic taxonomic investigation. Strain H642(T) grew between 20 and 40 °C (optimal 28-37 °C), pH 6.0-10.0 (optimal 7.0-9.0) and at NaCl concentrations between 1.0 and 20.0 % (optimal 2.0-8.0 %). It was positive for catalase, but negative for oxidase. Ubiquinone-10 was present as the major respiratory ubiquinone. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, four unknown glycolipids and one unknown lipid. Phylogenetic analysis of the 16S rRNA gene sequence revealed that strain H642(T) belongs to the genus Pelagibacterium. Strain H642(T) was most closely related to Pelagibacterium halotolerans (with 98.4 % similarity), Pelagibacterium nitratireducens (97.3 %) and Pelagibacterium luteolum (96.2 %). DNA-DNA reassociation values between strain H642(T), P. halotolerans B2(T) and P. nitratireducens JLT2005(T) were 38.0 and 25.3 %, respectively. The genomic DNA G + C content of strain H642(T) was determined to be 44.4 mol%. Based on genotypic, chemotaxonomic and phenotypic data, strain H642(T) represents a novel species of the genus Pelagibacterium, for which the name Pelagibacterium lixinzhangensis sp. nov is proposed. The type strain is H642(T) (=CGMCC 1.10230(T)=JCM 16597(T)).

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Year:  2016        PMID: 26787545     DOI: 10.1007/s00284-016-0989-9

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  13 in total

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4.  CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.

Authors:  Joseph Felsenstein
Journal:  Evolution       Date:  1985-07       Impact factor: 3.694

5.  Nonstaining (KOH) method for determination of gram reactions of marine bacteria.

Authors:  J D Buck
Journal:  Appl Environ Microbiol       Date:  1982-10       Impact factor: 4.792

6.  The quantitative measurement of DNA hybridization from renaturation rates.

Authors:  J De Ley; H Cattoir; A Reynaerts
Journal:  Eur J Biochem       Date:  1970-01

7.  Pelagibacterium nitratireducens sp.nov., a marine Alphaproteobacterium isolated from the East China Sea.

Authors:  Qipei Li; Yongle Xu; Keshao Liu; Lanlan Cai; Yingnan Fu; Jia Sun; Rui Zhang
Journal:  Curr Microbiol       Date:  2013-01-09       Impact factor: 2.188

8.  Complete genome sequence of Pelagibacterium halotolerans B2(T).

Authors:  Ying-Yi Huo; Hong Cheng; Xi-Fang Han; Xia-Wei Jiang; Cong Sun; Xin-Qi Zhang; Xu-Fen Zhu; Yong-Feng Liu; Peng-Fei Li; Pei-Xiang Ni; Min Wu
Journal:  J Bacteriol       Date:  2012-01       Impact factor: 3.490

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10.  Cloning, expression and characterization of a halotolerant esterase from a marine bacterium Pelagibacterium halotolerans B2T.

Authors:  Xiawei Jiang; Yingyi Huo; Hong Cheng; Xinqi Zhang; Xufen Zhu; Min Wu
Journal:  Extremophiles       Date:  2012-04-06       Impact factor: 2.395

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