Literature DB >> 23299946

Pelagibacterium nitratireducens sp.nov., a marine Alphaproteobacterium isolated from the East China Sea.

Qipei Li1, Yongle Xu, Keshao Liu, Lanlan Cai, Yingnan Fu, Jia Sun, Rui Zhang.   

Abstract

A Gram-negative, rod-shaped, non-spore-forming aerobic bacterium, motile with a single polar flagellum, strain JLT2005(T), was isolated from surface seawater collected from the East China Sea and formed ivory white colonies on a rich organic medium. The strain was positive for catalase, oxidase, and urease. It grew in the presence of 0-12 % (w/v) NaCl (optimum 5 %), at 20-35 °C (optimum 25 °C), or at pH 6-10 (optimum pH 9). The major fatty acids (>10 %) were C(18:1)ω7c, C(19:0)ω8c cyclo, C(16:0), and C(18:0). The major polar lipids were phosphatidylglycerol, diphosphatidylglycerol, and five unidentified glycolipids. Ubiquinone-10 and Ubiquinone-11 were present as the major quinones. The DNA G+C content was 74.3 mol%. Phylogenetic analyses based on 16S rRNA gene sequences indicated that strain JLT2005(T) belongs to the genus Pelagibacterium in the family Hyphomicrobiaceae, class Alphaproteobacteria. The closest neighbors were Pelagibacterium halotolerans B2(T) (98.7 % similarity) and Pelagibacterium luteolum 1_C16_27(T) (97.1 % similarity). DNA-DNA relatedness values of strain JLT2005(T) with P. halotolerans B2(T) and with P. luteolum 1_C16_27(T) were 31.6 and 25 %. Evidence from genotypic, chemotaxonomic, and phenotypic data shows that strain JLT2005(T) represents a novel species of the genus Pelagibacterium, for which the name Pelagibacterium nitratireducens sp. nov is proposed. The type strain is JLT2005(T) (=CGMCC 1.10829(T) =JCM 17767(T)).

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Year:  2013        PMID: 23299946     DOI: 10.1007/s00284-012-0299-9

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  15 in total

1.  The linear PCR reaction: a simple and robust method for sequencing amplified rRNA genes.

Authors:  T M Embley
Journal:  Lett Appl Microbiol       Date:  1991-09       Impact factor: 2.858

2.  DETERMINATION OF CARBOHYDRATE METABOLISM OF MARINE BACTERIA.

Authors:  E LEIFSON
Journal:  J Bacteriol       Date:  1963-05       Impact factor: 3.490

3.  Hydrogen sulphide production by bacteria.

Authors:  P H CLARKE
Journal:  J Gen Microbiol       Date:  1953-06

4.  EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences.

Authors:  Jongsik Chun; Jae-Hak Lee; Yoonyoung Jung; Myungjin Kim; Seil Kim; Byung Kwon Kim; Young-Woon Lim
Journal:  Int J Syst Evol Microbiol       Date:  2007-10       Impact factor: 2.747

5.  Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature.

Authors:  J MARMUR; P DOTY
Journal:  J Mol Biol       Date:  1962-07       Impact factor: 5.469

6.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

7.  Reexamination of the association between melting point, buoyant density, and chemical base composition of deoxyribonucleic acid.

Authors:  J De Ley
Journal:  J Bacteriol       Date:  1970-03       Impact factor: 3.490

8.  The quantitative measurement of DNA hybridization from renaturation rates.

Authors:  J De Ley; H Cattoir; A Reynaerts
Journal:  Eur J Biochem       Date:  1970-01

9.  A detailed phenotypic characterisation of the type strains of Halomonas species.

Authors:  Jua Antonio Mata; José Martínez-Cánovas; Emilia Quesada; Victoria Béjar
Journal:  Syst Appl Microbiol       Date:  2002-10       Impact factor: 4.022

10.  Marinobacter pelagius sp. nov., a moderately halophilic bacterium.

Authors:  Xue-Wei Xu; Yue-Hong Wu; Chun-Sheng Wang; Jun-Yi Yang; Aharon Oren; Min Wu
Journal:  Int J Syst Evol Microbiol       Date:  2008-03       Impact factor: 2.747

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  2 in total

1.  Pelagibacterium limicola sp. nov., isolated from a soda alkali-saline soil.

Authors:  Wei Wei; Kaiyan Xing; Kaili Wang; Xinyu Hu; Xin Zhang; Fan Yang; Shujing Yang; Henglin Cui; Shenkui Liu; Lin Zhu
Journal:  Arch Microbiol       Date:  2021-03-14       Impact factor: 2.552

2.  Pelagibacterium lixinzhangensis sp. nov., a Novel Member of the Genus Pelagibacterium.

Authors:  Na Yang; Chaomin Sun
Journal:  Curr Microbiol       Date:  2016-01-20       Impact factor: 2.188

  2 in total

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