Literature DB >> 26771203

Cell Penetrant Inhibitors of the KDM4 and KDM5 Families of Histone Lysine Demethylases. 2. Pyrido[3,4-d]pyrimidin-4(3H)-one Derivatives.

Susan M Westaway1, Alex G S Preston1, Michael D Barker1, Fiona Brown2, Jack A Brown1, Matthew Campbell1, Chun-wa Chung2, Gerard Drewes3, Robert Eagle2, Neil Garton1, Laurie Gordon2, Carl Haslam2, Thomas G Hayhow1, Philip G Humphreys1, Gerard Joberty3, Roy Katso2, Laurens Kruidenier1, Melanie Leveridge2, Michelle Pemberton2, Inma Rioja1, Gail A Seal1, Tracy Shipley1, Onkar Singh2, Colin J Suckling4, Joanna Taylor2, Pamela Thomas2, David M Wilson1, Kevin Lee1, Rab K Prinjha1.   

Abstract

Following the discovery of cell penetrant pyridine-4-carboxylate inhibitors of the KDM4 (JMJD2) and KDM5 (JARID1) families of histone lysine demethylases (e.g., 1), further optimization led to the identification of non-carboxylate inhibitors derived from pyrido[3,4-d]pyrimidin-4(3H)-one. A number of exemplars such as compound 41 possess interesting activity profiles in KDM4C and KDM5C biochemical and target-specific, cellular mechanistic assays.

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Year:  2016        PMID: 26771203     DOI: 10.1021/acs.jmedchem.5b01538

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  18 in total

1.  Structure-Based Engineering of Irreversible Inhibitors against Histone Lysine Demethylase KDM5A.

Authors:  John R Horton; Clayton B Woodcock; Qin Chen; Xu Liu; Xing Zhang; John Shanks; Ganesha Rai; Bryan T Mott; Daniel J Jansen; Stephen C Kales; Mark J Henderson; Matthew Cyr; Katherine Pohida; Xin Hu; Pranav Shah; Xin Xu; Ajit Jadhav; David J Maloney; Matthew D Hall; Anton Simeonov; Haian Fu; Paula M Vertino; Xiaodong Cheng
Journal:  J Med Chem       Date:  2018-11-15       Impact factor: 7.446

2.  CADD medicine: design is the potion that can cure my disease.

Authors:  Eric S Manas; Darren V S Green
Journal:  J Comput Aided Mol Des       Date:  2017-01-09       Impact factor: 3.686

Review 3.  Inhibitors of Protein Methyltransferases and Demethylases.

Authors:  H Ümit Kaniskan; Michael L Martini; Jian Jin
Journal:  Chem Rev       Date:  2017-03-24       Impact factor: 60.622

Review 4.  KDM5B is a master regulator of the H3K4-methylome in stem cells, development and cancer.

Authors:  Besa Xhabija; Benjamin L Kidder
Journal:  Semin Cancer Biol       Date:  2018-11-16       Impact factor: 15.707

Review 5.  Recent Advances with KDM4 Inhibitors and Potential Applications.

Authors:  Qiong Wu; Brandon Young; Yan Wang; Andrew M Davidoff; Zoran Rankovic; Jun Yang
Journal:  J Med Chem       Date:  2022-07-15       Impact factor: 8.039

6.  Structural Basis for KDM5A Histone Lysine Demethylase Inhibition by Diverse Compounds.

Authors:  John R Horton; Xu Liu; Molly Gale; Lizhen Wu; John R Shanks; Xing Zhang; Philip J Webber; Joshua S K Bell; Stephen C Kales; Bryan T Mott; Ganesha Rai; Daniel J Jansen; Mark J Henderson; Daniel J Urban; Matthew D Hall; Anton Simeonov; David J Maloney; Margaret A Johns; Haian Fu; Ajit Jadhav; Paula M Vertino; Qin Yan; Xiaodong Cheng
Journal:  Cell Chem Biol       Date:  2016-07-14       Impact factor: 8.116

7.  Autochthonous tumors driven by Rb1 loss have an ongoing requirement for the RBP2 histone demethylase.

Authors:  Samuel K McBrayer; Benjamin A Olenchock; Gabriel J DiNatale; Diana D Shi; Januka Khanal; Rebecca B Jennings; Jesse S Novak; Matthew G Oser; Alissa K Robbins; Rebecca Modiste; Dennis Bonal; Javid Moslehi; Roderick T Bronson; Donna Neuberg; Quang-De Nguyen; Sabina Signoretti; Julie-Aurore Losman; William G Kaelin
Journal:  Proc Natl Acad Sci U S A       Date:  2018-04-02       Impact factor: 11.205

8.  Structural analysis of human KDM5B guides histone demethylase inhibitor development.

Authors:  Catrine Johansson; Srikannathasan Velupillai; Anthony Tumber; Aleksandra Szykowska; Edward S Hookway; Radoslaw P Nowak; Claire Strain-Damerell; Carina Gileadi; Martin Philpott; Nicola Burgess-Brown; Na Wu; Jola Kopec; Andrea Nuzzi; Holger Steuber; Ursula Egner; Volker Badock; Shonagh Munro; Nicholas B LaThangue; Sue Westaway; Jack Brown; Nick Athanasou; Rab Prinjha; Paul E Brennan; Udo Oppermann
Journal:  Nat Chem Biol       Date:  2016-05-23       Impact factor: 15.040

9.  Jmjd2/Kdm4 demethylases are required for expression of Il3ra and survival of acute myeloid leukemia cells.

Authors:  Karl Agger; Satoru Miyagi; Marianne Terndrup Pedersen; Susanne M Kooistra; Jens Vilstrup Johansen; Kristian Helin
Journal:  Genes Dev       Date:  2016-06-02       Impact factor: 11.361

10.  Pyrido[3,4-d]pyrimidin-4(3H)-one metabolism mediated by aldehyde oxidase is blocked by C2-substitution.

Authors:  Angela Hayes; N Yi Mok; Manjuan Liu; Ching Thai; Alan T Henley; Butrus Atrash; Rachel M Lanigan; Jemmy Sejberg; Yann-Vaï Le Bihan; Vassilios Bavetsias; Julian Blagg; Florence I Raynaud
Journal:  Xenobiotica       Date:  2016-10-26       Impact factor: 1.908

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