Literature DB >> 26766785

SSB binds to the RecG and PriA helicases in vivo in the absence of DNA.

Cong Yu1,2, Hui Yin Tan2,3, Meerim Choi2,3, Adam J Stanenas2,3, Alicia K Byrd4, Kevin D Raney4, Christopher S Cohan5, Piero R Bianco1,2,3.   

Abstract

The E. coli single-stranded DNA-binding protein (SSB) binds to the fork DNA helicases RecG and PriA in vitro. Typically for binding to occur, 1.3 m ammonium sulfate must be present, bringing into question the validity of these results as these are nonphysiological conditions. To determine whether SSB can bind to these helicases, we examined binding in vivo. First, using fluorescence microscopy, we show that SSB localizes PriA and RecG to the vicinity of the inner membrane in the absence of DNA damage. Localization requires that SSB be in excess over the DNA helicases and the SSB C-terminus and both PriA and RecG be present. Second, using the purification of tagged complexes, our results show that SSB binds to PriA and RecG in vivo, in the absence of DNA. We propose that this may be the 'storage form' of RecG and PriA. We further propose that when forks stall, RecG and PriA are targeted to the fork by SSB, which, by virtue of its high affinity for single-stranded DNA, allows these helicases to outcompete other proteins. This ensures their actions in the early stages of the rescue of stalled replication forks.
© 2016 The Molecular Biology Society of Japan and John Wiley & Sons Australia, Ltd.

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Year:  2016        PMID: 26766785      PMCID: PMC4738028          DOI: 10.1111/gtc.12334

Source DB:  PubMed          Journal:  Genes Cells        ISSN: 1356-9597            Impact factor:   1.891


  64 in total

1.  Two modes of PriA binding to DNA.

Authors:  P Nurse; J Liu; K J Marians
Journal:  J Biol Chem       Date:  1999-08-27       Impact factor: 5.157

Review 2.  PriA: at the crossroads of DNA replication and recombination.

Authors:  K J Marians
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1999

3.  The importance of repairing stalled replication forks.

Authors:  M M Cox; M F Goodman; K N Kreuzer; D J Sherratt; S J Sandler; K J Marians
Journal:  Nature       Date:  2000-03-02       Impact factor: 49.962

4.  Initiation of replication of plasmid ColE1 DNA by RNA polymerase, ribonuclease H, and DNA polymerase I.

Authors:  T Itoh; J Tomizawa
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1979

5.  Stabilization of a stalled replication fork by concerted actions of two helicases.

Authors:  Taku Tanaka; Hisao Masai
Journal:  J Biol Chem       Date:  2005-12-13       Impact factor: 5.157

6.  Resolution of converging replication forks by RecQ and topoisomerase III.

Authors:  Catherine Suski; Kenneth J Marians
Journal:  Mol Cell       Date:  2008-06-20       Impact factor: 17.970

7.  ATPase/helicase motif mutants of Escherichia coli PriA protein essential for recombination-dependent DNA replication.

Authors:  Taku Tanaka; Chika Taniyama; Ken-Ichi Arai; Hisao Masai
Journal:  Genes Cells       Date:  2003-03       Impact factor: 1.891

8.  RuvA and RuvB proteins facilitate the bypass of heterologous DNA insertions during RecA protein-mediated DNA strand exchange.

Authors:  L E Iype; E A Wood; R B Inman; M M Cox
Journal:  J Biol Chem       Date:  1994-10-07       Impact factor: 5.157

9.  A prepriming DNA replication enzyme of Escherichia coli. I. Purification of protein n': a sequence-specific, DNA-dependent ATPase.

Authors:  J Shlomai; A Kornberg
Journal:  J Biol Chem       Date:  1980-07-25       Impact factor: 5.157

10.  RecG interacts directly with SSB: implications for stalled replication fork regression.

Authors:  Jackson A Buss; Yuji Kimura; Piero R Bianco
Journal:  Nucleic Acids Res       Date:  2008-11-05       Impact factor: 16.971

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  24 in total

1.  Allosteric effects of SSB C-terminal tail on assembly of E. coli RecOR proteins.

Authors:  Min Kyung Shinn; Alexander G Kozlov; Timothy M Lohman
Journal:  Nucleic Acids Res       Date:  2021-02-26       Impact factor: 16.971

Review 2.  Imaging of DNA and Protein-DNA Complexes with Atomic Force Microscopy.

Authors:  Yuri L Lyubchenko; Luda S Shlyakhtenko
Journal:  Crit Rev Eukaryot Gene Expr       Date:  2016       Impact factor: 1.807

Review 3.  SSB and the RecG DNA helicase: an intimate association to rescue a stalled replication fork.

Authors:  Piero R Bianco; Yuri L Lyubchenko
Journal:  Protein Sci       Date:  2017-03-17       Impact factor: 6.725

4.  The intrinsically disordered linker of E. coli SSB is critical for the release from single-stranded DNA.

Authors:  Hui Yin Tan; Luke A Wilczek; Sasheen Pottinger; Maria Manosas; Cong Yu; Trong Nguyenduc; Piero R Bianco
Journal:  Protein Sci       Date:  2017-03-08       Impact factor: 6.725

5.  Dynamics of the E. coli β-Clamp Dimer Interface and Its Influence on DNA Loading.

Authors:  Bilyana N Koleva; Hatice Gokcan; Alessandro A Rizzo; Socheata Lim; Kevin Jeanne Dit Fouque; Angelina Choy; Melissa L Liriano; Francisco Fernandez-Lima; Dmitry M Korzhnev; G Andrés Cisneros; Penny J Beuning
Journal:  Biophys J       Date:  2019-07-05       Impact factor: 4.033

Review 6.  The tale of SSB.

Authors:  Piero R Bianco
Journal:  Prog Biophys Mol Biol       Date:  2016-11-09       Impact factor: 3.667

7.  The IDL of E. coli SSB links ssDNA and protein binding by mediating protein-protein interactions.

Authors:  Piero R Bianco; Sasheen Pottinger; Hui Yin Tan; Trong Nguyenduc; Kervin Rex; Umesh Varshney
Journal:  Protein Sci       Date:  2017-01-26       Impact factor: 6.725

8.  Atomic force microscopy-based characterization of the interaction of PriA helicase with stalled DNA replication forks.

Authors:  Yaqing Wang; Zhiqiang Sun; Piero R Bianco; Yuri L Lyubchenko
Journal:  J Biol Chem       Date:  2020-03-24       Impact factor: 5.157

9.  Characterize the Interaction of the DNA Helicase PriA with the Stalled DNA Replication Fork Using Atomic Force Microscopy.

Authors:  Yaqing Wang; Zhiqiang Sun; Piero R Bianco; Yuri L Lyubchenko
Journal:  Bio Protoc       Date:  2021-03-05

10.  SSB Facilitates Fork-Substrate Discrimination by the PriA DNA Helicase.

Authors:  Hui Yin Tan; Piero R Bianco
Journal:  ACS Omega       Date:  2021-06-15
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