Literature DB >> 26758295

Influence of surface charge, binding site residues and glycosylation on Thielavia terrestris cutinase biochemical characteristics.

Abhijit N Shirke1,2, Danielle Basore2,3, Samantha Holton2,4, An Su1,2, Evan Baugh5, Glenn L Butterfoss6, George Makhatadze1,2,3, Christopher Bystroff7,8,9, Richard A Gross10,11,12.   

Abstract

Cutinases are esterases of industrial importance for applications in recycling and surface modification of polyesters. The cutinase from Thielavia terrestris (TtC) is distinct in terms of its ability to retain its stability and activity in acidic pH. Stability and activity in acidic pHs are desirable for esterases as the pH of the reaction tends to go down with the generation of acid. The pH stability and activity are governed by the charged state of the residues involved in catalysis or in substrate binding. In this study, we performed the detailed structural and biochemical characterization of TtC coupled with surface charge analysis to understand its acidic tolerance. The stability of TtC in acidic pH was rationalized by evaluating the contribution of charge interactions to the Gibbs free energy of unfolding at varying pHs. The activity of TtC was found to be limited by substrate binding affinity, which is a function of the surface charge. Additionally, the presence of glycosylation affects the biochemical characteristics of TtC owing to steric interactions with residues involved in substrate binding.

Entities:  

Keywords:  Biochemical characterization; Cutinase; Glycosylation; Polyester hydrolysis; Substrate binding; Surface charge

Mesh:

Substances:

Year:  2016        PMID: 26758295      PMCID: PMC4955843          DOI: 10.1007/s00253-015-7254-1

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  51 in total

1.  Protein stability and surface electrostatics: a charged relationship.

Authors:  Samantha S Strickler; Alexey V Gribenko; Alexander V Gribenko; Timothy R Keiffer; Jessica Tomlinson; Tracey Reihle; Vakhtang V Loladze; George I Makhatadze
Journal:  Biochemistry       Date:  2006-03-07       Impact factor: 3.162

2.  pH-Dependent conformational stability of the ribotoxin alpha-sarcin and four active site charge substitution variants.

Authors:  Maria Flor García-Mayoral; Alvaro Martínez del Pozo; Ramón Campos-Olivas; José G Gavilanes; Jorge Santoro; Manuel Rico; Douglas V Laurents; Marta Bruix
Journal:  Biochemistry       Date:  2006-11-21       Impact factor: 3.162

3.  Rational stabilization of enzymes by computational redesign of surface charge-charge interactions.

Authors:  Alexey V Gribenko; Mayank M Patel; Jiajing Liu; Scott A McCallum; Chunyu Wang; George I Makhatadze
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-05       Impact factor: 11.205

4.  Cloning and characterization of a novel acidic cutinase from Sirococcus conigenus.

Authors:  Antti Nyyssölä; Ville Pihlajaniemi; Mari Häkkinen; Hanna Kontkanen; Markku Saloheimo; Tiina Nakari-Setälä
Journal:  Appl Microbiol Biotechnol       Date:  2014-04       Impact factor: 4.813

Review 5.  Protein engineering of cellulases.

Authors:  Andreas S Bommarius; Minjeong Sohn; Yuzhi Kang; Jay H Lee; Matthew J Realff
Journal:  Curr Opin Biotechnol       Date:  2014-05-08       Impact factor: 9.740

6.  Structural and functional studies on a thermostable polyethylene terephthalate degrading hydrolase from Thermobifida fusca.

Authors:  Christian Roth; Ren Wei; Thorsten Oeser; Johannes Then; Christina Föllner; Wolfgang Zimmermann; Norbert Sträter
Journal:  Appl Microbiol Biotechnol       Date:  2014-04-13       Impact factor: 4.813

7.  Effects of Asn-33 glycosylation on the thermostability of Thermomyces lanuginosus lipase.

Authors:  J Zhu; H Liu; J Zhang; P Wang; S Liu; G Liu; L Wu
Journal:  J Appl Microbiol       Date:  2014-05-02       Impact factor: 3.772

8.  Isolation of a novel cutinase homolog with polyethylene terephthalate-degrading activity from leaf-branch compost by using a metagenomic approach.

Authors:  Sintawee Sulaiman; Saya Yamato; Eiko Kanaya; Joong-Jae Kim; Yuichi Koga; Kazufumi Takano; Shigenori Kanaya
Journal:  Appl Environ Microbiol       Date:  2011-12-22       Impact factor: 4.792

9.  Solid-state NMR and SAXS studies provide a structural basis for the activation of alphaB-crystallin oligomers.

Authors:  Stefan Jehle; Ponni Rajagopal; Benjamin Bardiaux; Stefan Markovic; Ronald Kühne; Joseph R Stout; Victoria A Higman; Rachel E Klevit; Barth-Jan van Rossum; Hartmut Oschkinat
Journal:  Nat Struct Mol Biol       Date:  2010-08-29       Impact factor: 15.369

10.  Transesterification of oil mixtures catalyzed by microencapsulated cutinase in reversed micelles.

Authors:  Sara M Badenes; Francisco Lemos; Joaquim M S Cabral
Journal:  Biotechnol Lett       Date:  2009-11-27       Impact factor: 2.461

View more
  4 in total

1.  Screening of commercial enzymes for poly(ethylene terephthalate) (PET) hydrolysis and synergy studies on different substrate sources.

Authors:  Aline Machado de Castro; Adriano Carniel; José Nicomedes Junior; Absai da Conceição Gomes; Érika Valoni
Journal:  J Ind Microbiol Biotechnol       Date:  2017-04-19       Impact factor: 3.346

Review 2.  Enzymatic Remediation of Polyethylene Terephthalate (PET)-Based Polymers for Effective Management of Plastic Wastes: An Overview.

Authors:  Ankita Maurya; Amrik Bhattacharya; Sunil Kumar Khare
Journal:  Front Bioeng Biotechnol       Date:  2020-11-19

3.  Genomic and transcriptomic analysis of the thermophilic lignocellulose-degrading fungus Thielavia terrestris LPH172.

Authors:  Monika Tõlgo; Silvia Hüttner; Peter Rugbjerg; Nguyen Thanh Thuy; Vu Nguyen Thanh; Johan Larsbrink; Lisbeth Olsson
Journal:  Biotechnol Biofuels       Date:  2021-06-03       Impact factor: 6.040

Review 4.  Current Advances in the Biodegradation and Bioconversion of Polyethylene Terephthalate.

Authors:  Xinhua Qi; Wenlong Yan; Zhibei Cao; Mingzhu Ding; Yingjin Yuan
Journal:  Microorganisms       Date:  2021-12-26
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.