| Literature DB >> 26751805 |
Abstract
Biomarkers are the measurable changes associated with a physiological or pathophysiological process. Unlike blood, urine is not subject to homeostatic mechanisms. Therefore, greater fluctuations could occur in urine than in blood, better reflecting the changes in human body. The roadmap of urine biomarker era was proposed. Although urine analysis has been attempted for clinical diagnosis, and urine has been monitored during the progression of many diseases, particularly urinary system diseases, whether urine can reflect brain disease status remains uncertain. As some biomarkers of brain diseases can be detected in the body fluids such as cerebrospinal fluid and blood, there is a possibility that urine also contain biomarkers of brain diseases. This review summarizes the clues of brain diseases reflected in the urine proteome and metabolome.Entities:
Keywords: Biomarkers; Brain diseases; Metabolomics; Proteomics; Urine
Mesh:
Substances:
Year: 2016 PMID: 26751805 PMCID: PMC4747650 DOI: 10.1016/j.gpb.2015.08.005
Source DB: PubMed Journal: Genomics Proteomics Bioinformatics ISSN: 1672-0229 Impact factor: 7.691
Summary of urinary biomarkers of human neuropsychiatric disorders
| MDD | MALDI-TOF MS-based peptidomics | 66 | 41 | Serum albumin, apolipoprotein A-I, HSPG | Protein AMBP | |
| NMR-based metabolomics | 134 | 126 | Formate, alanine | Malonate, | ||
| GC–MS-based metabolomics | 134 | 126 | Sorbitol, uric acid, azelaic acid | Hippuric acid, quinolinic acid, tyrosine | ||
| BD | NMR and GC–MS-based metabolomics | 71 | 126 | Azelaic acid, β-alanine, α-hydroxybutyrate | Pseudouridine, 2,4-dihydroxypyrimidine | |
| GC–MS-based metabolomics | 71 | 94 | 2,4-Dihydroxypyrimidine | |||
| NMR-based metabolomics | 86 | 96 | α-Hydroxybutyrate, isobutyrate | Choline, | ||
| NMR-based metabolomics | 42 male | 53 male | α-Hydroxybutyrate, formate | Choline, | ||
| NMR-based metabolomics | 44 female | 43 female | α-Hydroxybutyrate | Oxalacetate, acetone, | ||
| ASD | NMR-based metabolomics | 39 | 62 | Glutamate | ||
| NMR-based metabolomics | 21 | 21 | 3-(3-Hydroxyphenyl)-3-hydroxypropanoic, 3,4-dihydroxybutyric acid, glycolic acid, glycine, | Fructose, 1,2,3-butanetriol, propylene glycol | ||
| GC–MS-based metabolomics | 14 | 10 | Oxalic acid, β-hydroxybutyric acid, ribonic acid, m-hydroxybenzoic acid | Phosphoric acid, sebacic acid | ||
| Schizophrenia | MS/MS, UPLC–MS and NMR-based metabolomics | 11 | 11 | Uric acid, pregnanediol, valine, glycine, glucose | Creatinine, hippurate, creatine, citrate, α-KG, taurine, TMAO | |
| GC-TOF and NMR-based metabolomics | 112 | 120 | β-Hydroxybutyrate | |||
Note: MDD, major depressive disorder; BD, bipolar disorder; ASD, autism spectrum disorder; HSPG, basement membrane-specific heparan sulfate proteoglycan core protein; AMBP, alpha-1-microglobulin/bikunin precursor; α-KG, α-ketoglutaric acid; TMAO, trimethylamine-N-oxide.
Summary of urinary biomarkers of neurodegenerative diseases
| Stroke | 2-DE-based proteomics | Rat | 8 stroke-prone spontaneously-hypertensive rats | 5 Wistar-Kyoto rats | Transferrin, hemopexin, albumin, transthyretin, α2-HS-glycoprotein, Gc-globulin, α1-antitrypsin, kallikrein-binding protein | ||
| CE-MS-based proteomics | Human | 101 | 48 | Classifiers contains 14 biomarkers or 35 biomarkers | |||
| NMR-based metabolomics | Human | 28 | 30 | Citrate, dimethylamine, creatinine, glycine, hippurate | |||
| AD | NMR-based metabolomics | Mouse | 3–5 each for 4, 10, 15 months | 3–5 | 3-Hydroxykynurenine, homogentisate, allantoin | Dimethylamine, trimethylamine | |
| LC–MS-based metabolomics | Mouse | 12 | 12 | Methionine, desaminotyrosine | |||
| PD | LC–MS-based metabolomics | Human | 106 | 104 | Cortisol,11-deoxycortisol, 21-deoxycortisol, histidine, urocanic acid, imidazoleacetic acid, hydroxyphenylacetic acid | ||
| MScl | LC–MS-based proteomics | Human | 31 | 8 | Levels of 531 peptides from MScl patients and 36 peptides from controls were altered in the third trimester compared to the postpartum period, 43 peptides are associated with MScl | ||
| TSEs | 2-DE-based proteomics | Cattle | 13 | 14 | 9 spots in 2-DE | ||
| 2-DE and LC–MS-based proteomics | Mouse | 4 scrapie mice | 4 controls and 4 Alzheimer mice at each time point | Classifier contains 20 spots | |||
Note: AD, Alzheimer’s disease; PD, Parkinson’s disease; MScl, multiple sclerosis; TSEs, transmissible spongiform encephalopathies.
Summary of urinary biomarkers of human brain tumors and injury
| NEN | NMR-based metabolomics | 28 | 17 | Citrate, hippurate | ||
| TBI | MS-based metabolomics | 5 | 5 | 2476 discriminant variables | ||
Note: NEN, neuroendocrine neoplasms; TBI, traumatic brain injury.