Literature DB >> 26750543

Comparison of π-hole tetrel bonding with σ-hole halogen bonds in complexes of XCN (X = F, Cl, Br, I) and NH3.

Vincent de Paul N Nziko1, Steve Scheiner.   

Abstract

In addition to the standard halogen bond formed when NH3 approaches XCN (X = F, Cl, Br, I) along its molecular axis, a perpendicular approach is also possible, toward a π-hole that is present above the X-C bond. MP2/aug-cc-pVDZ calculations indicate the latter geometry is favored for X = F, and the σ-hole structure is preferred for the heavier halogens. The π-hole structure is stabilized by charge transfer from the NH3 lone pair into the π*(CN) antibonding orbital, and is characterized by a bond path from the N of NH3 to the C atom of XCN, a form of tetrel bond. The most stable 2 : 1 NH3/XCN heterotrimer for X = F and Cl is cyclic and contains a tetrel bond augmented by a pair of NHN H-bonds. For X = Br and I, the favored trimer is noncyclic, stabilized by a tetrel and a halogen bond.

Entities:  

Year:  2016        PMID: 26750543     DOI: 10.1039/c5cp07545a

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  11 in total

1.  On the ability of pnicogen atoms to engage in both σ and π-hole complexes. Heterodimers of ZF2C6H5 (Z = P, As, Sb, Bi) and NH3.

Authors:  Wiktor Zierkiewicz; Mariusz Michalczyk; Rafał Wysokiński; Steve Scheiner
Journal:  J Mol Model       Date:  2019-05-08       Impact factor: 1.810

2.  Theoretical study of noncovalent interactions in XCN···YO2H (X = F, Cl, Br, I; Y = P, As, Sb) complexes.

Authors:  Qiang Zhao
Journal:  J Mol Model       Date:  2017-05-12       Impact factor: 1.810

3.  Competition between tetrel bond and pnicogen bond in complexes of TX3-ZX2 and NH3.

Authors:  Yan Li; Zhefeng Xu
Journal:  J Mol Model       Date:  2018-08-20       Impact factor: 1.810

4.  Strong Tetrel Bonds: Theoretical Aspects and Experimental Evidence.

Authors:  Mehdi D Esrafili; Parisasadat Mousavian
Journal:  Molecules       Date:  2018-10-15       Impact factor: 4.411

Review 5.  Could Quantum Mechanical Properties Be Reflected on Classical Molecular Dynamics? The Case of Halogenated Organic Compounds of Biological Interest.

Authors:  Lucas de Azevedo Santos; Ingrid G Prandi; Teodorico C Ramalho
Journal:  Front Chem       Date:  2019-12-13       Impact factor: 5.221

6.  Tetrel Bonds between Phenyltrifluorosilane and Dimethyl Sulfoxide: Influence of Basis Sets, Substitution and Competition.

Authors:  Xiulin An; Xin Yang; Qingzhong Li
Journal:  Molecules       Date:  2021-11-29       Impact factor: 4.411

7.  Halogen Bonds Formed between Substituted Imidazoliums and N Bases of Varying N-Hybridization.

Authors:  Steve Scheiner
Journal:  Molecules       Date:  2017-09-29       Impact factor: 4.411

8.  Theoretical Studies of IR and NMR Spectral Changes Induced by Sigma-Hole Hydrogen, Halogen, Chalcogen, Pnicogen, and Tetrel Bonds in a Model Protein Environment.

Authors:  Mariusz Michalczyk; Wiktor Zierkiewicz; Rafał Wysokiński; Steve Scheiner
Journal:  Molecules       Date:  2019-09-12       Impact factor: 4.411

9.  Versatility of the Cyano Group in Intermolecular Interactions.

Authors:  Steve Scheiner
Journal:  Molecules       Date:  2020-09-30       Impact factor: 4.411

10.  Interactions in Model Ionic Dyads and Triads Containing Tetrel Atoms.

Authors:  Sean A C McDowell; Ruijing Wang; Qingzhong Li
Journal:  Molecules       Date:  2020-09-14       Impact factor: 4.411

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