Literature DB >> 2674682

c-Ha-ras gene bidirectional promoter expressed in vitro: location and regulation.

N F Lowndes1, J Paul, J Wu, M Allan.   

Abstract

Increased transcriptional activity of the c-Ha-ras gene product is correlated with induction of several important human tumor types. For this reason, we have investigated the nature of the c-Ha-ras promoter and the factors that regulate its expression. Using S1 and primer extension analysis of c-Ha-ras RNA from EJ cells, we have identified 18 initiation sites within an upstream exon (exon -1) whose 3' end (the donor splice site [D]) is located 1,105 base pairs (bp) upstream of the ATG codon. The furthest-upstream initiation site is located -191 bp relative to D, and the furthest downstream is located -16 bp relative to D. Transient expression assays, in which a series of mutants spanning this region were ligated to a promoterless chloramphenicol acetyltransferase vector, functionally confirmed the position and extent of this promoter. Mutational analysis further located a 47-bp element located between -243 and -196 relative to D that up-regulated transcriptional activity of the promoter region by 20- to 40-fold. This region contained both a GC box known to bind SP1 and a CCAAT box. Insertion of a simian virus 40 enhancer 5' to the promoter up-regulated transcription from each initiation site by approximately 10- to 20-fold. We have also localized, both by chloramphenicol acetyltransferase assay and by S1 analysis, a strong promoter operating in the direction opposite that of the gene and originating immediately 5' to the 47-bp regulatory region. The reverse promoter was found to have nine initiation sites between -248 and -278 relative to D.

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Year:  1989        PMID: 2674682      PMCID: PMC362437          DOI: 10.1128/mcb.9.9.3758-3770.1989

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  65 in total

1.  Transformation of mammalian cells with genes from procaryotes and eucaryotes.

Authors:  M Wigler; R Sweet; G K Sim; B Wold; A Pellicer; E Lacy; T Maniatis; S Silverstein; R Axel
Journal:  Cell       Date:  1979-04       Impact factor: 41.582

2.  Sizing and mapping of early adenovirus mRNAs by gel electrophoresis of S1 endonuclease-digested hybrids.

Authors:  A J Berk; P A Sharp
Journal:  Cell       Date:  1977-11       Impact factor: 41.582

3.  Mapping of RNA by a modification of the Berk-Sharp procedure: the 5' termini of 15 S beta-globin mRNA precursor and mature 10 s beta-globin mRNA have identical map coordinates.

Authors:  R F Weaver; C Weissmann
Journal:  Nucleic Acids Res       Date:  1979-11-10       Impact factor: 16.971

4.  Determination of RNA sequences by primer directed synthesis and sequencing of their cDNA transcripts.

Authors:  P K Ghosh; V B Reddy; M Piatak; P Lebowitz; S M Weissman
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

5.  Differential response of multiple epsilon-globin cap sites to cis- and trans-acting controls.

Authors:  M Allan; J D Zhu; P Montague; J Paul
Journal:  Cell       Date:  1984-09       Impact factor: 41.582

6.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

7.  Dual evolutionary origin for the rat genetic sequences of Harvey murine sarcoma virus.

Authors:  R W Ellis; D DeFeo; J M Maryak; H A Young; T Y Shih; E H Chang; D R Lowy; E M Scolnick
Journal:  J Virol       Date:  1980-11       Impact factor: 5.103

8.  Localization of the src gene product of the Harvey strain of MSV to plasma membrane of transformed cells by electron microscopic immunocytochemistry.

Authors:  M C Willingham; I Pastan; T Y Shih; E M Scolnick
Journal:  Cell       Date:  1980-04       Impact factor: 41.582

9.  Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease.

Authors:  J M Chirgwin; A E Przybyla; R J MacDonald; W J Rutter
Journal:  Biochemistry       Date:  1979-11-27       Impact factor: 3.162

10.  Transcriptional analysis of human zeta globin genes.

Authors:  N J Proudfoot; T R Rutherford; G A Partington
Journal:  EMBO J       Date:  1984-07       Impact factor: 11.598

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  10 in total

1.  A short, highly repetitive element in intron -1 of the human c-Ha-ras gene acts as a block to transcriptional readthrough by a viral promoter.

Authors:  N F Lowndes; P Bushel; L Mendelsohn; J Wu; M Y Yen; M Allan
Journal:  Mol Cell Biol       Date:  1990-09       Impact factor: 4.272

2.  Correlation between patterns of DNase I-hypersensitive sites and upstream promoter activity of the human epsilon-globin gene at different stages of erythroid development.

Authors:  P Bushel; K Rego; L Mendelsohn; M Allan
Journal:  Mol Cell Biol       Date:  1990-03       Impact factor: 4.272

3.  New nucleotide sequence data on the EMBL File Server.

Authors: 
Journal:  Nucleic Acids Res       Date:  1989-11-25       Impact factor: 16.971

4.  A negative regulatory element in the bcl-2 5'-untranslated region inhibits expression from an upstream promoter.

Authors:  R L Young; S J Korsmeyer
Journal:  Mol Cell Biol       Date:  1993-06       Impact factor: 4.272

5.  Initiation binding repressor, a factor that binds to the transcription initiation site of the histone h5 gene, is a glycosylated member of a family of cell growth regulators [corrected].

Authors:  A Gómez-Cuadrado; M Martín; M Noël; A Ruiz-Carrillo
Journal:  Mol Cell Biol       Date:  1995-12       Impact factor: 4.272

6.  Procyclic acidic repetitive protein (PARP) genes located in an unusually small alpha-amanitin-resistant transcription unit: PARP promoter activity assayed by transient DNA transfection of Trypanosoma brucei.

Authors:  G Rudenko; S Le Blancq; J Smith; M G Lee; A Rattray; L H Van der Ploeg
Journal:  Mol Cell Biol       Date:  1990-07       Impact factor: 4.272

7.  High sequence similarity within ras exons 1 and 2 in different mammalian species and phylogenetic divergence of the ras gene family.

Authors:  F Watzinger; B Mayr; E Haring; T Lion
Journal:  Mamm Genome       Date:  1998-03       Impact factor: 2.957

8.  Promoter hypomethylation as potential confounder of Ras gene overexpression and their clinical significance in subsets of urothelial carcinoma of bladder.

Authors:  Kiran Tripathi; Apul Goel; Atin Singhai; Minal Garg
Journal:  Mol Biol Rep       Date:  2021-02-23       Impact factor: 2.316

9.  Conserved cis-elements bind a protein complex that regulates Drosophila ras2/rop bidirectional expression.

Authors:  K Lightfoot; L Maltby; R Duarte; R Veale; O Segev
Journal:  Br J Cancer       Date:  1994-02       Impact factor: 7.640

10.  Activation and suppression of a cryptic promoter in the intron of the human melanoma-associated ME491 antigen gene.

Authors:  N Takahashi; H Hotta; M Homma
Journal:  Jpn J Cancer Res       Date:  1991-11
  10 in total

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