Literature DB >> 26738915

Paraclostridium benzoelyticum gen. nov., sp. nov., isolated from marine sediment and reclassification of Clostridium bifermentans as Paraclostridium bifermentans comb. nov. Proposal of a new genus Paeniclostridium gen. nov. to accommodate Clostridium sordellii and Clostridium ghonii.

T S Sasi Jyothsna1, L Tushar1, Ch Sasikala2, Ch V Ramana1.   

Abstract

Twenty-three rod-shaped, endospore-forming, Gram-stain-positive, obligately anaerobic bacteria were isolated from different marine sediment samples of Gujarat. All 23 strains shared 16S rRNA gene sequence similarity of ∼100 %. Strain JC272T was designated the type strain and shared highest sequence similarity with Clostridium bifermentans ATCC 638T (99.8 %), Clostridium ghonii JCM 1400T (98.0 %), Clostridium sordellii ATCC 9714T (97.9 %) and other members of the genus Clostridium ( < 96.4 %). C16 : 0, C18 : 0, C17 : 0, C16 : 1ω9c and iso-C16 : 0 were the major (>5 %) fatty acids. Strain JC272T contained diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine and two unidentified amino lipids. Genome-based analysis of average nucleotide identity (ANI) and in silico DNA-DNA hybridization (DDH) of strain JC272T with C. bifermentans ATCC 638T yielded values of 94.35 and 58.5 ± 2.8 %, respectively. The DNA G+C content of strain JC272T was 28.3 mol%. Strain JC272T together with C. bifermentans were found to fall outside Clostridium rRNA cluster I considered as Clostridium senso stricto. Based on ANI value, in-silico DDH, and distinct morphological and physiological differences from the previously described taxa, we suggest that strain JC272T represents a novel species of a new genus in the family Clostridiaceae, for which the name Paraclostridium benzoelyticum gen. nov., sp. nov. is proposed. The type strain is JC272T ( = KCTC 15476T = LMG 28745T). It is also proposed to transfer C. bifermentans to this new genus, as Paraclostridium bifermentans comb. nov. (type strain ATCC 638T = DSM 14991T = JCM 1386T). The genus Paeniclostridium gen. nov. is proposed to accommodate C. sordellii and C. ghonii as Paeniclostridium sordellii comb. nov. (type strain ATCC 9714T = LMG 15708T = JCM 3814T) and Paeniclostridium ghonii comb. nov. (type strain ATCC 25757T = DSM 15049T = JCM 1400T).

Entities:  

Year:  2016        PMID: 26738915     DOI: 10.1099/ijsem.0.000874

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  13 in total

Review 1.  Taxonomic hierarchy of the phylum Firmicutes and novel Firmicutes species originated from various environments in Korea.

Authors:  Chi Nam Seong; Joo Won Kang; Ji Hee Lee; So Yeon Seo; Jung Jae Woo; Chul Park; Kyung Sook Bae; Mi Sun Kim
Journal:  J Microbiol       Date:  2018-01-04       Impact factor: 3.422

2.  Adaptability of a Caproate-Producing Bacterium Contributes to Its Dominance in an Anaerobic Fermentation System.

Authors:  Huilin Wang; Yang Gu; Weicheng Zhou; Dong Zhao; Zongwei Qiao; Jia Zheng; Jiangjing Gao; Xiang Chen; Cong Ren; Yan Xu
Journal:  Appl Environ Microbiol       Date:  2021-08-11       Impact factor: 4.792

3.  Phylogenomic analysis of the family Peptostreptococcaceae (Clostridium cluster XI) and proposal for reclassification of Clostridium litorale (Fendrich et al. 1991) and Eubacterium acidaminophilum (Zindel et al. 1989) as Peptoclostridium litorale gen. nov. comb. nov. and Peptoclostridium acidaminophilum comb. nov.

Authors:  Michael Y Galperin; Vyacheslav Brover; Igor Tolstoy; Natalya Yutin
Journal:  Int J Syst Evol Microbiol       Date:  2016-10-07       Impact factor: 2.747

4.  SpoIVA-SipL Complex Formation Is Essential for Clostridioides difficile Spore Assembly.

Authors:  Megan H Touchette; Hector Benito de la Puebla; Priyanka Ravichandran; Aimee Shen
Journal:  J Bacteriol       Date:  2019-03-26       Impact factor: 3.490

5.  Identification of mucin degraders of the human gut microbiota.

Authors:  Stefano Raimondi; Eliana Musmeci; Francesco Candeliere; Alberto Amaretti; Maddalena Rossi
Journal:  Sci Rep       Date:  2021-05-27       Impact factor: 4.379

6.  Functional differentiation related to decomposing complex carbohydrates of intestinal microbes between two wild zokor species based on 16SrRNA sequences.

Authors:  Yao Zou; Nannan Liang; Xuxin Zhang; Chongxuan Han; Xiaoning Nan
Journal:  BMC Vet Res       Date:  2021-06-11       Impact factor: 2.741

Review 7.  Large Clostridial Toxins: Mechanisms and Roles in Disease.

Authors:  Kathleen E Orrell; Roman A Melnyk
Journal:  Microbiol Mol Biol Rev       Date:  2021-06-02       Impact factor: 13.044

8.  Genome-Wide CRISPR Screen Identifies Semaphorin 6A and 6B as Receptors for Paeniclostridium sordellii Toxin TcsL.

Authors:  Songhai Tian; Yang Liu; Hao Wu; Hao Liu; Ji Zeng; Mei Yuk Choi; Hong Chen; Ralf Gerhard; Min Dong
Journal:  Cell Host Microbe       Date:  2020-04-16       Impact factor: 31.316

9.  Early-life gut dysbiosis linked to juvenile mortality in ostriches.

Authors:  Elin Videvall; Se Jin Song; Hanna M Bensch; Maria Strandh; Anel Engelbrecht; Naomi Serfontein; Olof Hellgren; Adriaan Olivier; Schalk Cloete; Rob Knight; Charlie K Cornwallis
Journal:  Microbiome       Date:  2020-10-12       Impact factor: 14.650

10.  Prevalence and Antimicrobial Resistance of Paeniclostridium sordellii in Hospital Settings.

Authors:  Hanane Zerrouki; Sid-Ahmed Rebiahi; Yamina Elhabiri; Ahlam Fatmi; Sophie Alexandra Baron; Isabelle Pagnier; Seydina M Diene; Jean-Marc Rolain
Journal:  Antibiotics (Basel)       Date:  2021-12-29
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