| Literature DB >> 26735888 |
Fabio Giuseppe Liberante1, Tara Pouryahya1, Mary-Frances McMullin1, Shu-Dong Zhang1, Kenneth Ian Mills1.
Abstract
Myelodysplastic syndromes (MDS) represent a broad spectrum of diseases characterized by their clinical manifestation as one or more cytopenias, or a reduction in circulating blood cells. MDS is predominantly a disease of the elderly, with a median age in the UK of around 75. Approximately one third of MDS patients will develop secondary acute myeloid leukemia (sAML) that has a very poor prognosis. Unfortunately, most standard cytotoxic agents are often too toxic for older patients. This means there is a pressing unmet need for novel therapies that have fewer side effects to assist this vulnerable group. This challenge was tackled using bioinformatic analysis of available transcriptomic data to establish a gene-based signature of the development and progression of MDS. This signature was then used to identify novel therapeutic compounds via statistically-significant connectivity mapping. This approach suggested re-purposing an existing and widely-prescribed drug, bromocriptine as a novel potential therapy in these disease settings. This drug has shown selectivity for leukemic cells as well as synergy with current therapies.Entities:
Keywords: acute myeloid leukemia (AML); bromocriptine; myelodysplastic syndromes (MDS); re-purposed; therapy
Mesh:
Substances:
Year: 2016 PMID: 26735888 PMCID: PMC4872736 DOI: 10.18632/oncotarget.6773
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Figure 1(A) Overview of analytical approach (B) Kaplan-Meier for probability of AML transformation (C) Heatmap of expression for 50–50 gene signature (D) sscMap drug-signature connections. (A) Flowchart of analysis pipeline used to generate gene signature and identify compounds using sscMap (B) A Kaplan-Meier plot illustrating the stratification of a subset of MDS patient gene expression profiles between the prognostic classes and their risk of leukemic transformation (low, medium & high risk of transformation) (C) Hierarchical cluster of patient and donor gene expression profiles based on the identified 50–50 gene signature. Colored bars indicate patient or donor status. The model cell lines included in the screen are also represented in the heatmap and are connected to the heatmap to highlight their positioning. The expression values are presented as absolute microarray intensity values with yellow representing high expression and blue low expression. The grey and black bars underneath delineate the four clusters in the dendrogram, which are further discussed in the text. (D) A volcano plot of the connection scores and p-values generated by the sscMap tool between the gene expression signature and the broad institute perturbagen library. Each point represents a derived gene signature to perturbagen/cell line connection. The red line represents the threshold of statistical significance (∼3.573, p-value = ∼2.675 × 10−4) for the sscMap algorithm. There were 8 significant connections across all the signatures, all of which had a negative score and represented 4 drugs. The drugs with ≥ 2 connections are in bold.
Figure 2Drug dose-response in cell lines
Cell viability measured via ATP-based high-throughput assay normalized to vehicle-treated control. Drug doses are represented as logarithm base 10 of Molarity. Points represent averages from 3 replicates and error bars represent SEM. (A) Bromocriptine & Buspirone screened against MDS-L and OCI/AML-3 (B) Neuroleptic compound screen against MDS-L (C) Neuroleptic compound screen against OCI/AML-3 (D) Bromocriptine-treated SKM-1 & OCI/AML-2 cell lines.
Figure 3(A) Caspase/PARP cleavage (B) Caspase activity assay. (C) Methylcellulose colony assay. (A) Western blots of cell lysates probed for Caspase 3 (C3) and poly ADP ribose polymerase (PARP) and their cleaved forms at the labelled time points post bromocriptine treatment of OCI/AML-3 cells. Images are representative of westerns replicated three times. Arrowheads indicate cleaved PARP (B) Caspase 3/7 activity 24 h after bromocriptine treatment; measured via luminescent DEVD peptide-cleavage assay. Values represent averages from duplicates and error bars represent standard error of the mean. (C) Methylcellulose-based colony-forming assay for MDS-L cell line with representative image.
Figure 4(A) Primary mononuclear cell response to bromocriptine (B) Synergy of Bromocriptine and cytarabine. (A) Dose-response curve using ATP-based viability assay normalized to vehicle-treated cells. Samples represent peripheral blood mononuclear cells (PBMCs) from diagnostic AML samples or mobilized bone marrow donors. Points represent averages from 3 replicates and error bars represent SEM. (B) CalcuSyn synergy plots illustrating Combination Indices for doses of cytarabine and bromocriptine at and around the individual drug 72 h IC50 values. Values at 1.0 represent additive effect, whereas values below 1.0 suggest synergistic effect.