Literature DB >> 24078773

A drug repositioning approach identifies tricyclic antidepressants as inhibitors of small cell lung cancer and other neuroendocrine tumors.

Nadine S Jahchan1, Joel T Dudley, Pawel K Mazur, Natasha Flores, Dian Yang, Alec Palmerton, Anne-Flore Zmoos, Dedeepya Vaka, Kim Q T Tran, Margaret Zhou, Karolina Krasinska, Jonathan W Riess, Joel W Neal, Purvesh Khatri, Kwon S Park, Atul J Butte, Julien Sage.   

Abstract

UNLABELLED: Small cell lung cancer (SCLC) is an aggressive neuroendocrine subtype of lung cancer with high mortality. We used a systematic drug repositioning bioinformatics approach querying a large compendium of gene expression profiles to identify candidate U.S. Food and Drug Administration (FDA)-approved drugs to treat SCLC. We found that tricyclic antidepressants and related molecules potently induce apoptosis in both chemonaïve and chemoresistant SCLC cells in culture, in mouse and human SCLC tumors transplanted into immunocompromised mice, and in endogenous tumors from a mouse model for human SCLC. The candidate drugs activate stress pathways and induce cell death in SCLC cells, at least in part by disrupting autocrine survival signals involving neurotransmitters and their G protein-coupled receptors. The candidate drugs inhibit the growth of other neuroendocrine tumors, including pancreatic neuroendocrine tumors and Merkel cell carcinoma. These experiments identify novel targeted strategies that can be rapidly evaluated in patients with neuroendocrine tumors through the repurposing of approved drugs. SIGNIFICANCE: Our work shows the power of bioinformatics-based drug approaches to rapidly repurpose FDA-approved drugs and identifies a novel class of molecules to treat patients with SCLC, a cancer for which no effective novel systemic treatments have been identified in several decades. In addition, our experiments highlight the importance of novel autocrine mechanisms in promoting the growth of neuroendocrine tumor cells. ©2013 AACR.

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Year:  2013        PMID: 24078773      PMCID: PMC3864571          DOI: 10.1158/2159-8290.CD-13-0183

Source DB:  PubMed          Journal:  Cancer Discov        ISSN: 2159-8274            Impact factor:   39.397


  47 in total

Review 1.  Current management of small cell lung cancer.

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Journal:  Clin Chest Med       Date:  2011-09-28       Impact factor: 2.878

2.  Deconvolution of complex G protein-coupled receptor signaling in live cells using dynamic mass redistribution measurements.

Authors:  Ralf Schröder; Nicole Janssen; Johannes Schmidt; Anna Kebig; Nicole Merten; Stephanie Hennen; Anke Müller; Stefanie Blättermann; Marion Mohr-Andrä; Sabine Zahn; Jörg Wenzel; Nicola J Smith; Jesús Gomeza; Christel Drewke; Graeme Milligan; Klaus Mohr; Evi Kostenis
Journal:  Nat Biotechnol       Date:  2010-08-15       Impact factor: 54.908

3.  A crucial requirement for Hedgehog signaling in small cell lung cancer.

Authors:  Kwon-Sik Park; Luciano G Martelotto; Martin Peifer; Martin L Sos; Anthony N Karnezis; Moe R Mahjoub; Katie Bernard; Jamie F Conklin; Anette Szczepny; Jing Yuan; Ribo Guo; Beatrice Ospina; Jeanette Falzon; Samara Bennett; Tracey J Brown; Ana Markovic; Wendy L Devereux; Cory A Ocasio; James K Chen; Tim Stearns; Roman K Thomas; Marion Dorsch; Silvia Buonamici; D Neil Watkins; Craig D Peacock; Julien Sage
Journal:  Nat Med       Date:  2011-10-09       Impact factor: 53.440

4.  Discovery and preclinical validation of drug indications using compendia of public gene expression data.

Authors:  Marina Sirota; Joel T Dudley; Jeewon Kim; Annie P Chiang; Alex A Morgan; Alejandro Sweet-Cordero; Julien Sage; Atul J Butte
Journal:  Sci Transl Med       Date:  2011-08-17       Impact factor: 17.956

5.  Coexpression of normally incompatible developmental pathways in retinoblastoma genesis.

Authors:  Justina McEvoy; Jacqueline Flores-Otero; Jiakun Zhang; Katie Nemeth; Rachel Brennan; Cori Bradley; Fred Krafcik; Carlos Rodriguez-Galindo; Matthew Wilson; Shunbin Xiong; Guillermina Lozano; Julien Sage; Ligia Fu; Lotfi Louhibi; Jeff Trimarchi; Amar Pani; Richard Smeyne; Dianna Johnson; Michael A Dyer
Journal:  Cancer Cell       Date:  2011-08-16       Impact factor: 31.743

6.  Computational repositioning of the anticonvulsant topiramate for inflammatory bowel disease.

Authors:  Joel T Dudley; Marina Sirota; Mohan Shenoy; Reetesh K Pai; Silke Roedder; Annie P Chiang; Alex A Morgan; Minnie M Sarwal; Pankaj Jay Pasricha; Atul J Butte
Journal:  Sci Transl Med       Date:  2011-08-17       Impact factor: 17.956

7.  Molecular target class is predictive of in vitro response profile.

Authors:  Joel Greshock; Kurtis E Bachman; Yan Y Degenhardt; Junping Jing; Yuan H Wen; Stephen Eastman; Elizabeth McNeil; Christopher Moy; Ronald Wegrzyn; Kurt Auger; Mary Ann Hardwicke; Richard Wooster
Journal:  Cancer Res       Date:  2010-04-20       Impact factor: 12.701

8.  Distinct roles of cholinergic receptors in small cell lung cancer cells.

Authors:  Shuxiang Zhang; Shinsaku Togo; Kunihiko Minakata; Tao Gu; Rina Ohashi; Ken Tajima; Akiko Murakami; Shinichiro Iwakami; Jin Zhang; Canmao Xie; Kazuhisa Takahashi
Journal:  Anticancer Res       Date:  2010-01       Impact factor: 2.480

9.  Tricyclic antidepressants and the incidence of certain cancers: a study using the GPRD.

Authors:  A J Walker; T Card; T E Bates; K Muir
Journal:  Br J Cancer       Date:  2010-11-16       Impact factor: 7.640

10.  A computational approach to finding novel targets for existing drugs.

Authors:  Yvonne Y Li; Jianghong An; Steven J M Jones
Journal:  PLoS Comput Biol       Date:  2011-09-01       Impact factor: 4.475

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  145 in total

1.  OCTAD: an open workspace for virtually screening therapeutics targeting precise cancer patient groups using gene expression features.

Authors:  Billy Zeng; Benjamin S Glicksberg; Patrick Newbury; Evgeny Chekalin; Jing Xing; Ke Liu; Anita Wen; Caven Chow; Bin Chen
Journal:  Nat Protoc       Date:  2020-12-23       Impact factor: 13.491

Review 2.  Genome-wide significant loci: how important are they? Systems genetics to understand heritability of coronary artery disease and other common complex disorders.

Authors:  Johan L M Björkegren; Jason C Kovacic; Joel T Dudley; Eric E Schadt
Journal:  J Am Coll Cardiol       Date:  2015-03-03       Impact factor: 24.094

3.  A Systems Pharmacology Approach Uncovers Wogonoside as an Angiogenesis Inhibitor of Triple-Negative Breast Cancer by Targeting Hedgehog Signaling.

Authors:  Yujie Huang; Jiansong Fang; Weiqiang Lu; Zihao Wang; Qi Wang; Yuan Hou; Xingwu Jiang; Ofer Reizes; Justin Lathia; Ruth Nussinov; Charis Eng; Feixiong Cheng
Journal:  Cell Chem Biol       Date:  2019-06-06       Impact factor: 8.116

Review 4.  A survey of current trends in computational drug repositioning.

Authors:  Jiao Li; Si Zheng; Bin Chen; Atul J Butte; S Joshua Swamidass; Zhiyong Lu
Journal:  Brief Bioinform       Date:  2015-03-31       Impact factor: 11.622

5.  Teaching an old dog new tricks: drug repositioning in small cell lung cancer.

Authors:  Jing Wang; Lauren Averett Byers
Journal:  Cancer Discov       Date:  2013-12       Impact factor: 39.397

6.  Drug repurposing for glioblastoma based on molecular subtypes.

Authors:  Yang Chen; Rong Xu
Journal:  J Biomed Inform       Date:  2016-09-30       Impact factor: 6.317

7.  Iron oxide nanoparticles inhibit tumour growth by inducing pro-inflammatory macrophage polarization in tumour tissues.

Authors:  Saeid Zanganeh; Gregor Hutter; Ryan Spitler; Olga Lenkov; Morteza Mahmoudi; Aubie Shaw; Jukka Sakari Pajarinen; Hossein Nejadnik; Stuart Goodman; Michael Moseley; Lisa Marie Coussens; Heike Elisabeth Daldrup-Link
Journal:  Nat Nanotechnol       Date:  2016-09-26       Impact factor: 39.213

Review 8.  Turning omics data into therapeutic insights.

Authors:  Amanda Kedaigle; Ernest Fraenkel
Journal:  Curr Opin Pharmacol       Date:  2018-08-24       Impact factor: 5.547

9.  Combining Human Disease Genetics and Mouse Model Phenotypes towards Drug Repositioning for Parkinson's disease.

Authors:  Yang Chen; Xiaoshu Cai; Rong Xu
Journal:  AMIA Annu Symp Proc       Date:  2015-11-05

Review 10.  Small cell lung cancer (SCLC): no treatment advances in recent years.

Authors:  Filippos Koinis; Athanasios Kotsakis; Vasileios Georgoulias
Journal:  Transl Lung Cancer Res       Date:  2016-02
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