| Literature DB >> 26730574 |
Johanna M Walz1,2, Daniel Boehringer1, Heidrun L Deissler3, Lothar Faerber2,4, Jens C Goepfert5, Peter Heiduschka6, Susannah M Kleeberger7, Alexa Klettner8, Tim U Krohne7, Nicole Schneiderhan-Marra5, Focke Ziemssen9, Andreas Stahl1.
Abstract
BACKGROUND: Vascular endothelial growth factor-A (VEGF-A) is intensively investigated in various medical fields. However, comparing VEGF-A measurements is difficult because sample acquisition and pre-analytic procedures differ between studies. We therefore investigated which variables act as confounders of VEGF-A measurements.Entities:
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Year: 2016 PMID: 26730574 PMCID: PMC4711588 DOI: 10.1371/journal.pone.0145375
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Overview of sample acquisition procedures and the distribution of samples from blood acquisition centers to measuring centers and central laboratory.
Investigated parameters.
| Potential confounder | Investigated by |
|---|---|
| Analyzing center | distribution of identical aliquots to three independent centers for ELISA analysis (using the same batch of ELISA kit R&D Cat No. DVE00) |
| Anticoagulant | obtaining plasma samples with three different anticoagulants: K2EDTA (di-potassium-ethylenediaminetetraacetic acid) |
| Cannula | using two types of cannulas: 23Gx¾” butterfly cannulas or 23G neonatal cannulas (both from Sarstedt, Nuernbrecht, Germany) |
| Centrifuge | utilizing two types of centrifuge: fixed-angle rotor (C1) or swing-out rotor (C2) (equivalent settings) |
| Time before centrifugation | centrifuging several samples (EDTA) immediately (within 20 minutes) after blood withdrawal and leaving other samples at room temperature for two hours; in additional experiments we stored EDTA, PECT and CTAD samples up to 24 hours at their respective storage conditions |
| Time after centrifugation | storing samples for 3–4 hours vs 6 hours after centrifugation before separation of plasma from cell pellet and subsequent freezing. EDTA samples were kept at room temperature, PECT samples at 4°C. |
| Intrapersonal variation over time | repeating sampling procedures 7 days later |
| Filling level | filling a predefined number of Monovette® and Microvette® tubes completely, another set about half |
| Analyzing method | measuring one aliquot of each batch using Luminex assay (R&D Systems, Human VEGF High Sensitivity Kit; LHSCM293) and one aliquot with ELISA (at the central laboratory) |
| Thrombocyte activation | measuring platelet-factor-4 (PF-4) using ELISA (R&D Systems, DPF40) |
| Precision of measurement in very low concentrations | diluting one subset of aliquots 1:10 and one subset 1:5 by adding Dulbecco’s Phosphate Buffered Saline (DPBS) |
| Recovery of added VEGF-A to human plasma samples | adding freshly reconstituted recombinant human VEGF-A165 (R&D Systems; Sf21-derived) to a subset of EDTA, PECT and CTAD samples covering a range of 67 pg/ml to 1,333 pg/ml |
| Specificity of confounding parameter | measuring IGF-1 (insulin like growth factor-1) using ELISA (R&D Systems; DG100) as an independent biomarker |
Results of the multiple regression analysis.
| Potential confounder | Mean deviation of VEGF-A results (estimate) [pg/ml] (±SD) | p- values | |
|---|---|---|---|
| (Intercept) | 68.1 (±7.1) | <0.001 | |
| Analyzing center | Center A vs. | -5.5 (±6.5) | 0.396 |
| Center B vs. | -21.3 (±6.6) | 0.001 | |
| Center C vs. | -26.1 (±8.5) | 0.002 | |
| Center D vs. | -32.2 (±8.5) | <0.001 | |
| Center E vs. | 35.2 (±8.0) | <0.001 | |
| Center F vs. | 32.9 (±8.0) | <0.001 | |
| Anticoagulant | PECT vs. | -33.8 (±4.8) | <0.001 |
| CTAD vs. | -73.4 (±7.7) | <0.001 | |
| Cannula | neonatal vs. | 5.0 (±5.0) | 0.322 |
| Type of centrifuge | swing-out rotor vs. | -23.2 (±5.7) | <0.001 |
| Time before centrifugation | Time to centrifugation: 2h vs. | -8.3 (±6.3) | 0.188 |
| Time after centrifugation | Time after centrifugation: 3-4h vs. | -0.04 (±6.9) | 0.995 |
| Time after centrifugation: 6h vs. | 7.7 (±7.3) | 0.293 | |
| Intrapersonal variation over time | week 2 vs. | -2.9 (±3.6) | 0.423 |
| Sex | Female vs. | 23.6 (±3.7) | <0.001 |
| Filling level | half filled vs. | 7.1 (±4.0) | 0.0741 |
| Measuring method | Multiplex bead array vs. | -38.1 (±5.1) | <0.001 |
Results of the multiple regression analysis; the first two columns show the investigated parameters, whereby the bold printed one was used as reference for this parameter. The column “Mean deviation of VEGF-A results (estimate)” shows the strength of the influence of this parameter in the regression model (± standard deviation)
Fig 22.1 (a-c) Paired plots (light orange) and box plots (blue) of VEGF-A levels measured at blood taking centers, measuring centers and at the central laboratory (CL). Connecting lines illustrate the measured VEGF-A levels from identical aliquots of samples measured at the acquisition center, the measuring center and the central laboratory; 2.2 Impact of the anticoagulant (EDTA, PECT, CTAD) on measurement of VEGF-A, PF-4 and IGF-1 from plasma. VEGF-A levels measured from PECT (a) and CTAD (b) plasma are much lower than from EDTA plasma. Similar to VEGF-A, PF-4 values are higher in EDTA plasma than in PECT (c) or CTAD (d) plasma, indicating increased thrombolysis in EDTA samples compared to PECT or CTAD. IGF-1 levels are not affected by the choice of anticoagulant (e, f) indicating that the choice of coagulant is not a general confounder for all biomarkers. (g) VEGF-A levels obtained after spiking VEGF-A into PBS containing EDTA, PECT or CTAD yielded comparable results thus confirming that CTAD or PECT do not interfere with the VEGF ELISA assay. It was noted, however, that VEGF stored at -80°C for over one year yields lower recovery rates in all samples, irrespective of the anticagulant used; 2.3 Impact of the kind of centrifuge used for separating plasma from the cell pellet (equivalent settings were applied). VEGF-A (a) and PF-4 (b) levels were higher in some samples from the fixed angle rotor compared to the swing-out rotor. IGF-1 levels (c) were not affected by the type of centrifuge; 2.4 Comparison of measurements obtained with two methods: ELISA vs. multiplex bead array (Luminex). (a) box-plot analysis showing that absolute values differ between the two measurement methods; (b, c) scatter plot and Bland-Altmann plot, however, demonstrate a good correlation of relative measurement results from the two methods; (d, e) VEGF-A protein standards from both the ELISA kit and the Luminex kit were measured in both assays. In either assay, the VEGF-A standard provided with the Luminex kit resulted in higher signals for identical protein concentrations compared to the VEGF-A standard provided with the ELISA kit. This translates in lower measurements of patient sample VEGF-A levels when these are normalized to the Luminex VEGF-A standard as opposed to the ELISA standard (irrespective of the assay used).
Fig 3(a) Comparison of the mathematically expected and measured VEGF-A levels after a 1:5 and 1:10 sample dilution. Both ELISA and multiplex bead array measurements measure slightly higher values than mathematically expected after sample dilution; (b) Addition of up to 1.333 pg/ml of recombinant VEGF-A to a plasma sample yields recovery rates of about 80% in all anticoagulants. Exp. = expected value; Meas. = measured value.
Fig 4Impact of time before (a,b,c) and after (d-g) centrifugation on measured VEGF-A and PF-4 levels.
In some EDTA samples, VEGF-A (a,c,d) and PF-4 levels (b,f) increased with longer incubation times. This was particularly significant when EDTA samples were stored for longer periods of time before centrifugation (c). In PECT samples (c,e,g), VEGF and PF-4 values were not affected by longer sample storage times.
Fig 5(a) Scatter plot for the influence of cannula (neonatal vs. butterfly) on measured VEGF-A plasma levels; (b) Scatter plot for intrapersonal fluctuations in plasma VEGF-A levels over one week; (c) Scatter plot for the impact of filling level of blood collection tubes on the resulting VEGF-A levels.
Location of values near the bisecting line indicates comparable measurement results.