Literature DB >> 26710264

Photochemical Regulation of Gene Expression Using Caged siRNAs with Single Terminal Vitamin E Modification.

Yuzhuo Ji1, Jiali Yang1, Li Wu1, Lijia Yu1, Xinjing Tang2.   

Abstract

Caged siRNAs with a single photolabile linker and/or vitamin E (vitE) modification at the 5' terminal were rationally designed and synthesized. These virtually inactive caged siRNAs were successfully used to photoregulate both firefly luciferase and GFP gene expression in cells with up to an 18.6-fold enhancement of gene silencing activity, which represents one of the best reported photomodulation of gene silencing efficiencies to date. siRNA tracking and vitE competition experiments indicated that the inactivity of vitE-modified siRNAs was not due to the bulky moiety of vitE; rather, the involvement of vitE-binding proteins has a large contribution to caged siRNA inactivation by preventing the dissociation of siRNA/lipo complexes and/or siRNA release. Further patterning experiments revealed the ability to spatially regulate gene expression through simple light irradiation.
© 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  caged oligonucleotides; gene regulation; photoactivation; siRNA; vitamin E modification

Mesh:

Substances:

Year:  2015        PMID: 26710264     DOI: 10.1002/anie.201510921

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  13 in total

Review 1.  Optochemical Control of Biological Processes in Cells and Animals.

Authors:  Nicholas Ankenbruck; Taylor Courtney; Yuta Naro; Alexander Deiters
Journal:  Angew Chem Int Ed Engl       Date:  2018-02-01       Impact factor: 15.336

Review 2.  Translational control of gene function through optically regulated nucleic acids.

Authors:  Kristie E Darrah; Alexander Deiters
Journal:  Chem Soc Rev       Date:  2021-11-29       Impact factor: 54.564

3.  Photoactivatable Circular Caged Oligonucleotides for Transcriptome In Vivo Analysis (TIVA).

Authors:  Linlin Yang; Dora von Trentini; HyunBum Kim; Jai-Yoon Sul; James H Eberwine; Ivan J Dmochowski
Journal:  ChemPhotoChem       Date:  2021-06-23

4.  Efficient Synthesis of Light-Triggered Circular Antisense Oligonucleotides Targeting Cellular Protein Expression.

Authors:  Linlin Yang; Hyun Bum Kim; Jai-Yoon Sul; Sean B Yeldell; James H Eberwine; Ivan J Dmochowski
Journal:  Chembiochem       Date:  2018-04-17       Impact factor: 3.164

Review 5.  Targeting drug delivery with light: A highly focused approach.

Authors:  Teresa L Rapp; Cole A DeForest
Journal:  Adv Drug Deliv Rev       Date:  2021-01-22       Impact factor: 15.470

Review 6.  Stimuli-responsive oligonucleotides in prodrug-based approaches for gene silencing.

Authors:  Françoise Debart; Christelle Dupouy; Jean-Jacques Vasseur
Journal:  Beilstein J Org Chem       Date:  2018-02-19       Impact factor: 2.883

7.  Caged circular siRNAs for photomodulation of gene expression in cells and mice.

Authors:  Liangliang Zhang; Duanwei Liang; Yuan Wang; Dong Li; Jinhao Zhang; Li Wu; Mengke Feng; Fan Yi; Luzheng Xu; Liandi Lei; Quan Du; XinJing Tang
Journal:  Chem Sci       Date:  2017-10-19       Impact factor: 9.825

8.  Multimerized self-assembled caged two-in-one siRNA nanoparticles for photomodulation of RNAi-induced gene silencing.

Authors:  Changmai Chen; Nannan Jing; Zhongyu Wang; Yu Zhang; Wei Chen; Xinjing Tang
Journal:  Chem Sci       Date:  2020-10-12       Impact factor: 9.825

9.  Controlled in-cell activation of RNA therapeutics using bond-cleaving bio-orthogonal chemistry.

Authors:  Irfan Khan; Leah M Seebald; Neil M Robertson; Mehmet V Yigit; Maksim Royzen
Journal:  Chem Sci       Date:  2017-06-14       Impact factor: 9.825

Review 10.  Conditionally Activated ("Caged") Oligonucleotides.

Authors:  Linlin Yang; Ivan J Dmochowski
Journal:  Molecules       Date:  2021-03-09       Impact factor: 4.411

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