Literature DB >> 26690535

LncRNAs: emerging players in gene regulation and disease pathogenesis.

Mina Kazemzadeh1, Reza Safaralizadeh, Ayla Valinezhad Orang.   

Abstract

The advent of next-generation sequencing has demonstrated that eukaryotic genomes are extremely complex than what were previously thought. Recent studies revealed that in addition to protein-coding genes, nonprotein-coding genes have allocated a large fraction of the genome. Long noncoding RNA (lncRNA) genes are classified as nonprotein-coding genes, serving as a molecular signal, decoy, guide and scaffold. They were suggested to play important roles in chromatin states, epigenetic and posttranscriptional regulation of genes. Aberrant expression of lncRNAs and changes in their structure are associated with a wide spectrum of diseases ranging from different types of cancer and neurodegeneration to ?-thalassaemia. The purpose of this study was to summarize the current progress in understanding the genomic bases and origin of lncRNAs. Moreover, this study focusses on the diverse functions of lncRNAs in normal cells as well as various types of disease to illustrate the potential impacts of lncRNAs on diverse biological processes and their therapeutic significance.

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Year:  2015        PMID: 26690535     DOI: 10.1007/s12041-015-0561-6

Source DB:  PubMed          Journal:  J Genet        ISSN: 0022-1333            Impact factor:   1.166


  87 in total

Review 1.  Long noncoding RNAs in cell biology.

Authors:  Michael B Clark; John S Mattick
Journal:  Semin Cell Dev Biol       Date:  2011-01-20       Impact factor: 7.727

2.  A novel molecular mechanism in human genetic disease: a DNA repeat-derived lncRNA.

Authors:  Daphne S Cabianca; Valentina Casa; Davide Gabellini
Journal:  RNA Biol       Date:  2012-10-01       Impact factor: 4.652

3.  Endogenous miRNA sponge lincRNA-RoR regulates Oct4, Nanog, and Sox2 in human embryonic stem cell self-renewal.

Authors:  Yue Wang; Zhenyu Xu; Junfeng Jiang; Chen Xu; Jiuhong Kang; Lei Xiao; Minjuan Wu; Jun Xiong; Xiaocan Guo; Houqi Liu
Journal:  Dev Cell       Date:  2013-03-28       Impact factor: 12.270

4.  A natural antisense transcript regulates Zeb2/Sip1 gene expression during Snail1-induced epithelial-mesenchymal transition.

Authors:  Manuel Beltran; Isabel Puig; Cristina Peña; José Miguel García; Ana Belén Alvarez; Raúl Peña; Félix Bonilla; Antonio García de Herreros
Journal:  Genes Dev       Date:  2008-03-15       Impact factor: 11.361

5.  Expression of a noncoding RNA is elevated in Alzheimer's disease and drives rapid feed-forward regulation of beta-secretase.

Authors:  Mohammad Ali Faghihi; Farzaneh Modarresi; Ahmad M Khalil; Douglas E Wood; Barbara G Sahagan; Todd E Morgan; Caleb E Finch; Georges St Laurent; Paul J Kenny; Claes Wahlestedt
Journal:  Nat Med       Date:  2008-06-29       Impact factor: 53.440

6.  Repressing the repressor: a lincRNA as a MicroRNA sponge in embryonic stem cell self-renewal.

Authors:  Ee-chun Cheng; Haifan Lin
Journal:  Dev Cell       Date:  2013-04-15       Impact factor: 12.270

7.  Genome-wide determination of RNA stability reveals hundreds of short-lived noncoding transcripts in mammals.

Authors:  Hidenori Tani; Rena Mizutani; Kazi Abdus Salam; Keiko Tano; Kenichi Ijiri; Ai Wakamatsu; Takao Isogai; Yutaka Suzuki; Nobuyoshi Akimitsu
Journal:  Genome Res       Date:  2012-02-27       Impact factor: 9.043

8.  Shaping the Genome with Non-Coding RNAs.

Authors:  Xue Q D Wang; Jennifer L Crutchley; Josée Dostie
Journal:  Curr Genomics       Date:  2011-08       Impact factor: 2.236

9.  OLE RNA protects extremophilic bacteria from alcohol toxicity.

Authors:  Jason G Wallace; Zhiyuan Zhou; Ronald R Breaker
Journal:  Nucleic Acids Res       Date:  2012-05-04       Impact factor: 16.971

Review 10.  The genetic signatures of noncoding RNAs.

Authors:  John S Mattick
Journal:  PLoS Genet       Date:  2009-04-24       Impact factor: 5.917

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  33 in total

1.  TFPI2AS1, a novel lncRNA that inhibits cell proliferation and migration in lung cancer.

Authors:  Shenglan Gao; Ziying Lin; Chunyan Li; Yahong Wang; Lawei Yang; Baoan Zou; Jie Chen; Jianwen Li; Zeqing Song; Gang Liu
Journal:  Cell Cycle       Date:  2017-09-21       Impact factor: 4.534

2.  Suppression of lncRNA NORAD may affect cell migration and apoptosis in gastric cancer cells.

Authors:  Negin Raei; Reza Safaralizadeh; Mohammadali Hosseinpourfeizi; Saeid Latifi-Navid; Abbas Yazdanbod
Journal:  Mol Biol Rep       Date:  2022-01-27       Impact factor: 2.316

3.  Down-regulated lncRNA ROR in tumor-educated platelets as a liquid-biopsy biomarker for nasopharyngeal carcinoma.

Authors:  Jiazhou Wei; Xian Meng; Xiuqi Wei; Kaidong Zhu; Li Du; Hui Wang
Journal:  J Cancer Res Clin Oncol       Date:  2022-09-15       Impact factor: 4.322

4.  LncRNA DGCR5 suppresses neuronal apoptosis to improve acute spinal cord injury through targeting PRDM5.

Authors:  Huafeng Zhang; Wengang Wang; Ning Li; Peng Li; Ming Liu; Junwei Pan; Dan Wang; Junwei Li; Yuanyuan Xiong; Lei Xia
Journal:  Cell Cycle       Date:  2018-09-11       Impact factor: 4.534

5.  HIF2-Induced Long Noncoding RNA RAB11B-AS1 Promotes Hypoxia-Mediated Angiogenesis and Breast Cancer Metastasis.

Authors:  Yanling Niu; Lei Bao; Yan Chen; Chenliang Wang; Maowu Luo; Bo Zhang; Mi Zhou; Jennifer E Wang; Yisheng V Fang; Ashwani Kumar; Chao Xing; Yingfei Wang; Weibo Luo
Journal:  Cancer Res       Date:  2020-01-03       Impact factor: 12.701

6.  microRNA dependent and independent deregulation of long non-coding RNAs by an oncogenic herpesvirus.

Authors:  Sunantha Sethuraman; Lauren Appleby Gay; Vaibhav Jain; Irina Haecker; Rolf Renne
Journal:  PLoS Pathog       Date:  2017-07-17       Impact factor: 6.823

Review 7.  Regulatory Roles of Long Non-Coding RNAs in the Central Nervous System and Associated Neurodegenerative Diseases.

Authors:  Zhenzhen Quan; Da Zheng; Hong Qing
Journal:  Front Cell Neurosci       Date:  2017-06-30       Impact factor: 5.505

8.  Deregulated lncRNAs in B Cells from Patients with Active Tuberculosis.

Authors:  Yurong Fu; Xianqin Xu; Junfang Xue; Wenping Duan; Zhengjun Yi
Journal:  PLoS One       Date:  2017-01-26       Impact factor: 3.240

9.  LncRNAMORT is upregulated in myocardial infarction and promotes the apoptosis of cardiomyocyte by downregulating miR-93.

Authors:  Jing Lv; Yi Zhu; Shanglong Yao
Journal:  BMC Cardiovasc Disord       Date:  2020-05-25       Impact factor: 2.298

10.  Prognostic value of lncRNA ROR expression in various cancers: a meta-analysis.

Authors:  Renfu Lu; Junjian Chen; Lingwen Kong; Hao Zhu
Journal:  Biosci Rep       Date:  2018-09-28       Impact factor: 3.840

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