Literature DB >> 23597480

Repressing the repressor: a lincRNA as a MicroRNA sponge in embryonic stem cell self-renewal.

Ee-chun Cheng1, Haifan Lin.   

Abstract

Large intergenic noncoding (linc) RNAs constitute a new dimension of posttranscriptional gene regulation. In this issue of Developmental Cell, Wang et al. (2013) find that linc-RoR maintains human embryonic stem cell self-renewal by functioning as a sponge to trap miR-145, thus regulating core pluripotency factors Oct4, Nanog, and Sox2.
Copyright © 2013 Elsevier Inc. All rights reserved.

Entities:  

Year:  2013        PMID: 23597480      PMCID: PMC3906851          DOI: 10.1016/j.devcel.2013.03.020

Source DB:  PubMed          Journal:  Dev Cell        ISSN: 1534-5807            Impact factor:   12.270


  9 in total

1.  Coding-independent regulation of the tumor suppressor PTEN by competing endogenous mRNAs.

Authors:  Yvonne Tay; Lev Kats; Leonardo Salmena; Dror Weiss; Shen Mynn Tan; Ugo Ala; Florian Karreth; Laura Poliseno; Paolo Provero; Ferdinando Di Cunto; Judy Lieberman; Isidore Rigoutsos; Pier Paolo Pandolfi
Journal:  Cell       Date:  2011-10-14       Impact factor: 41.582

2.  MicroRNA sponges: competitive inhibitors of small RNAs in mammalian cells.

Authors:  Margaret S Ebert; Joel R Neilson; Phillip A Sharp
Journal:  Nat Methods       Date:  2007-08-12       Impact factor: 28.547

3.  Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells.

Authors:  Sabine Loewer; Moran N Cabili; Mitchell Guttman; Yuin-Han Loh; Kelly Thomas; In Hyun Park; Manuel Garber; Matthew Curran; Tamer Onder; Suneet Agarwal; Philip D Manos; Sumon Datta; Eric S Lander; Thorsten M Schlaeger; George Q Daley; John L Rinn
Journal:  Nat Genet       Date:  2010-11-07       Impact factor: 38.330

Review 4.  Emerging roles for natural microRNA sponges.

Authors:  Margaret S Ebert; Phillip A Sharp
Journal:  Curr Biol       Date:  2010-10-12       Impact factor: 10.834

5.  Natural RNA circles function as efficient microRNA sponges.

Authors:  Thomas B Hansen; Trine I Jensen; Bettina H Clausen; Jesper B Bramsen; Bente Finsen; Christian K Damgaard; Jørgen Kjems
Journal:  Nature       Date:  2013-02-27       Impact factor: 49.962

6.  MicroRNA-145 regulates OCT4, SOX2, and KLF4 and represses pluripotency in human embryonic stem cells.

Authors:  Na Xu; Thales Papagiannakopoulos; Guangjin Pan; James A Thomson; Kenneth S Kosik
Journal:  Cell       Date:  2009-04-30       Impact factor: 41.582

7.  Target mimicry provides a new mechanism for regulation of microRNA activity.

Authors:  José Manuel Franco-Zorrilla; Adrián Valli; Marco Todesco; Isabel Mateos; María Isabel Puga; Ignacio Rubio-Somoza; Antonio Leyva; Detlef Weigel; Juan Antonio García; Javier Paz-Ares
Journal:  Nat Genet       Date:  2007-07-22       Impact factor: 38.330

8.  lincRNAs act in the circuitry controlling pluripotency and differentiation.

Authors:  Mitchell Guttman; Julie Donaghey; Bryce W Carey; Manuel Garber; Jennifer K Grenier; Glen Munson; Geneva Young; Anne Bergstrom Lucas; Robert Ach; Laurakay Bruhn; Xiaoping Yang; Ido Amit; Alexander Meissner; Aviv Regev; John L Rinn; David E Root; Eric S Lander
Journal:  Nature       Date:  2011-08-28       Impact factor: 49.962

9.  A long noncoding RNA controls muscle differentiation by functioning as a competing endogenous RNA.

Authors:  Marcella Cesana; Davide Cacchiarelli; Ivano Legnini; Tiziana Santini; Olga Sthandier; Mauro Chinappi; Anna Tramontano; Irene Bozzoni
Journal:  Cell       Date:  2011-10-14       Impact factor: 41.582

  9 in total
  30 in total

Review 1.  LncRNAs: emerging players in gene regulation and disease pathogenesis.

Authors:  Mina Kazemzadeh; Reza Safaralizadeh; Ayla Valinezhad Orang
Journal:  J Genet       Date:  2015-12       Impact factor: 1.166

2.  Altered expression of LINC-ROR in cancer cell lines and tissues.

Authors:  Majdaddin Rezaei; Modjtaba Emadi-Baygi; Michèle J Hoffmann; Wolfgang A Schulz; Parvaneh Nikpour
Journal:  Tumour Biol       Date:  2015-08-28

3.  Differentially Expressed Long Non-Coding RNAs Were Predicted to Be Involved in the Control of Signaling Pathways in Pediatric Astrocytoma.

Authors:  Ruth Ruiz Esparza-Garrido; Juan Manuel Rodríguez-Corona; Javier Enrique López-Aguilar; Marco Antonio Rodríguez-Florido; Ana Claudia Velázquez-Wong; Rubí Viedma-Rodríguez; Fabio Salamanca-Gómez; Miguel Ángel Velázquez-Flores
Journal:  Mol Neurobiol       Date:  2016-10-13       Impact factor: 5.590

4.  Extensive ceRNA-ceRNA interaction networks mediated by miRNAs regulate development in multiple rhesus tissues.

Authors:  Juan Xu; Lin Feng; Zujing Han; Yongsheng Li; Aiwei Wu; Tingting Shao; Na Ding; Lili Li; Wei Deng; Xuebing Di; Jian Wang; Lianfeng Zhang; Xia Li; Kaitai Zhang; Shujun Cheng
Journal:  Nucleic Acids Res       Date:  2016-06-30       Impact factor: 16.971

5.  MicroRNA 140 Promotes Expression of Long Noncoding RNA NEAT1 in Adipogenesis.

Authors:  Ramkishore Gernapudi; Benjamin Wolfson; Yongshu Zhang; Yuan Yao; Peixin Yang; Hiroshi Asahara; Qun Zhou
Journal:  Mol Cell Biol       Date:  2015-10-12       Impact factor: 4.272

6.  Interaction between LINC-ROR and Stemness State in Gastric Cancer Cells with Helicobacter pylori Infection.

Authors:  Reihaneh Alsadat Mahmoudian; Maryam Lotfi Gharaie; Roya Abbaszadegan; Mohammad Mahdi Forghanifard; Mohammad Reza Abbaszadegan
Journal:  Iran Biomed J       Date:  2021-03-01

7.  A polymorphism rs12325489C>T in the lincRNA-ENST00000515084 exon was found to modulate breast cancer risk via GWAS-based association analyses.

Authors:  Na Li; Ping Zhou; Jian Zheng; Jieqiong Deng; Hongchun Wu; Wei Li; Fang Li; Hongbin Li; Jiachun Lu; Yifeng Zhou; Chun Zhang
Journal:  PLoS One       Date:  2014-05-30       Impact factor: 3.240

Review 8.  Mechanisms of miRNA-Mediated Gene Regulation from Common Downregulation to mRNA-Specific Upregulation.

Authors:  Ayla Valinezhad Orang; Reza Safaralizadeh; Mina Kazemzadeh-Bavili
Journal:  Int J Genomics       Date:  2014-08-10       Impact factor: 2.326

Review 9.  Long noncoding RNAs(lncRNAs) and the molecular hallmarks of aging.

Authors:  Ioannis Grammatikakis; Amaresh C Panda; Kotb Abdelmohsen; Myriam Gorospe
Journal:  Aging (Albany NY)       Date:  2014-12       Impact factor: 5.682

Review 10.  Competing endogenous RNAs (ceRNAs): new entrants to the intricacies of gene regulation.

Authors:  Reena V Kartha; Subbaya Subramanian
Journal:  Front Genet       Date:  2014-01-30       Impact factor: 4.599

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