Literature DB >> 26687736

The impact of next-generation sequencing on the DNA methylation-based translational cancer research.

Javier Soto1, Carlos Rodriguez-Antolin1, Elena Vallespín2, Javier de Castro Carpeño3, Inmaculada Ibanez de Caceres4.   

Abstract

Epigenetics is currently in an exponential phase of growth, constituting one of the most promising fields in science, particularly in cancer research. Impaired epigenetic processes can lead to abnormal gene activity or inactivity, causing cellular disorders that are closely associated with tumor initiation and progression. Thus, there is a pivotal role of massive sequencing techniques for epigenetics, which aim to find novel biomarkers, factors of prognosis and prediction, and targets for achieving personalized treatments. We present a brief description of the evolution of next-generation sequencing technologies and its coupling with DNA methylation analysis techniques, highlighting its future in translational medicine and presenting significant findings in several malignancies. We also expose critical topics related to the implementation of these approaches, which is expected to be affordable for most research centers in the near future.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Year:  2015        PMID: 26687736     DOI: 10.1016/j.trsl.2015.11.003

Source DB:  PubMed          Journal:  Transl Res        ISSN: 1878-1810            Impact factor:   7.012


  17 in total

1.  Accuracy and utility of an epigenetic biomarker for smoking in populations with varying rates of false self-report.

Authors:  Allan M Andersen; Robert A Philibert; Fredrick X Gibbons; Ronald L Simons; Jeffrey Long
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2017-06-14       Impact factor: 3.568

2.  Per- and polyfluoroalkyl substances, epigenetic age and DNA methylation: a cross-sectional study of firefighters.

Authors:  Jaclyn M Goodrich; Miriam M Calkins; Alberto J Caban-Martinez; Todd Stueckle; Casey Grant; Antonia M Calafat; Amy Nematollahi; Alesia M Jung; Judith M Graber; Timothy Jenkins; Angela L Slitt; Alisa Dewald; Julianne Cook Botelho; Shawn Beitel; Sally Littau; John Gulotta; Darin Wallentine; Jeff Hughes; Charles Popp; Jefferey L Burgess
Journal:  Epigenomics       Date:  2021-10-21       Impact factor: 4.357

3.  Accumulated promoter methylation as a potential biomarker for esophageal cancer.

Authors:  Xianzhen Peng; Hengchuan Xue; Lingshuang Lü; Peiyi Shi; Jianping Wang; Jianming Wang
Journal:  Oncotarget       Date:  2017-01-03

4.  Genes involved in development and differentiation are commonly methylated in cancers derived from multiple organs: a single-institutional methylome analysis using 1007 tissue specimens.

Authors:  Kentaro Ohara; Eri Arai; Yoriko Takahashi; Nanako Ito; Ayako Shibuya; Koji Tsuta; Ryoji Kushima; Hitoshi Tsuda; Hidenori Ojima; Hiroyuki Fujimoto; Shun-Ichi Watanabe; Hitoshi Katai; Takayuki Kinoshita; Tatsuhiro Shibata; Takashi Kohno; Yae Kanai
Journal:  Carcinogenesis       Date:  2017-03-01       Impact factor: 4.944

5.  An epigenomic approach to identifying differential overlapping and cis-acting lncRNAs in cisplatin-resistant cancer cells.

Authors:  Olga Vera; Carlos Rodriguez-Antolin; Javier de Castro; Florian A Karreth; Thomas A Sellers; Inmaculada Ibanez de Caceres
Journal:  Epigenetics       Date:  2018-04-02       Impact factor: 4.528

6.  Successful application of human-based methyl capture sequencing for methylome analysis in non-human primate models.

Authors:  Ja-Rang Lee; Dong-Sung Ryu; Sang-Je Park; Se-Hee Choe; Hyeon-Mu Cho; Sang-Rae Lee; Sun-Uk Kim; Young-Hyun Kim; Jae-Won Huh
Journal:  BMC Genomics       Date:  2018-04-18       Impact factor: 3.969

7.  Five-CpG-based prognostic signature for predicting survival in hepatocellular carcinoma patients.

Authors:  Feng Fang; Xiaoqing Wang; Tianqiang Song
Journal:  Cancer Biol Med       Date:  2018-11       Impact factor: 4.248

8.  Aberrantly methylated-differentially genes and pathways among Iranian patients with colorectal cancer.

Authors:  Mahla Ghorbani; Marjan Azghandi; Mohammad Amin Kerachian
Journal:  Cancer Cell Int       Date:  2021-07-03       Impact factor: 5.722

Review 9.  Epigenetic Modifications as Biomarkers of Tumor Development, Therapy Response, and Recurrence across the Cancer Care Continuum.

Authors:  Margaret L Thomas; Paola Marcato
Journal:  Cancers (Basel)       Date:  2018-04-01       Impact factor: 6.639

Review 10.  Profiling DNA Methylation Based on Next-Generation Sequencing Approaches: New Insights and Clinical Applications.

Authors:  Daniela Barros-Silva; C Joana Marques; Rui Henrique; Carmen Jerónimo
Journal:  Genes (Basel)       Date:  2018-08-23       Impact factor: 4.096

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.