Literature DB >> 26687363

SPED Light Sheet Microscopy: Fast Mapping of Biological System Structure and Function.

Raju Tomer1, Matthew Lovett-Barron1, Isaac Kauvar2, Aaron Andalman1, Vanessa M Burns3, Sethuraman Sankaran4, Logan Grosenick4, Michael Broxton5, Samuel Yang2, Karl Deisseroth6.   

Abstract

The goal of understanding living nervous systems has driven interest in high-speed and large field-of-view volumetric imaging at cellular resolution. Light sheet microscopy approaches have emerged for cellular-resolution functional brain imaging in small organisms such as larval zebrafish, but remain fundamentally limited in speed. Here, we have developed SPED light sheet microscopy, which combines large volumetric field-of-view via an extended depth of field with the optical sectioning of light sheet microscopy, thereby eliminating the need to physically scan detection objectives for volumetric imaging. SPED enables scanning of thousands of volumes-per-second, limited only by camera acquisition rate, through the harnessing of optical mechanisms that normally result in unwanted spherical aberrations. We demonstrate capabilities of SPED microscopy by performing fast sub-cellular resolution imaging of CLARITY mouse brains and cellular-resolution volumetric Ca(2+) imaging of entire zebrafish nervous systems. Together, SPED light sheet methods enable high-speed cellular-resolution volumetric mapping of biological system structure and function.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Year:  2015        PMID: 26687363      PMCID: PMC4775738          DOI: 10.1016/j.cell.2015.11.061

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  42 in total

1.  Optical sectioning deep inside live embryos by selective plane illumination microscopy.

Authors:  Jan Huisken; Jim Swoger; Filippo Del Bene; Joachim Wittbrodt; Ernst H K Stelzer
Journal:  Science       Date:  2004-08-13       Impact factor: 47.728

2.  Deep and fast live imaging with two-photon scanned light-sheet microscopy.

Authors:  Thai V Truong; Willy Supatto; David S Koos; John M Choi; Scott E Fraser
Journal:  Nat Methods       Date:  2011-07-17       Impact factor: 28.547

Review 3.  Open source tools for large-scale neuroscience.

Authors:  Jeremy Freeman
Journal:  Curr Opin Neurobiol       Date:  2015-05-16       Impact factor: 6.627

4.  Whole-brain functional imaging with two-photon light-sheet microscopy.

Authors:  Sébastien Wolf; Willy Supatto; Georges Debrégeas; Pierre Mahou; Sergei G Kruglik; Jean-Marc Sintes; Emmanuel Beaurepaire; Raphaël Candelier
Journal:  Nat Methods       Date:  2015-05       Impact factor: 28.547

5.  Light-sheet fluorescence microscopy for quantitative biology.

Authors:  Ernst H K Stelzer
Journal:  Nat Methods       Date:  2015-01       Impact factor: 28.547

6.  Imaging large-scale neural activity with cellular resolution in awake, mobile mice.

Authors:  Daniel A Dombeck; Anton N Khabbaz; Forrest Collman; Thomas L Adelman; David W Tank
Journal:  Neuron       Date:  2007-10-04       Impact factor: 17.173

7.  Spatially isotropic four-dimensional imaging with dual-view plane illumination microscopy.

Authors:  Yicong Wu; Peter Wawrzusin; Justin Senseney; Robert S Fischer; Ryan Christensen; Anthony Santella; Andrew G York; Peter W Winter; Clare M Waterman; Zhirong Bao; Daniel A Colón-Ramos; Matthew McAuliffe; Hari Shroff
Journal:  Nat Biotechnol       Date:  2013-10-13       Impact factor: 54.908

8.  Lattice light-sheet microscopy: imaging molecules to embryos at high spatiotemporal resolution.

Authors:  Bi-Chang Chen; Wesley R Legant; Kai Wang; Lin Shao; Daniel E Milkie; Michael W Davidson; Chris Janetopoulos; Xufeng S Wu; John A Hammer; Zhe Liu; Brian P English; Yuko Mimori-Kiyosue; Daniel P Romero; Alex T Ritter; Jennifer Lippincott-Schwartz; Lillian Fritz-Laylin; R Dyche Mullins; Diana M Mitchell; Joshua N Bembenek; Anne-Cecile Reymann; Ralph Böhme; Stephan W Grill; Jennifer T Wang; Geraldine Seydoux; U Serdar Tulu; Daniel P Kiehart; Eric Betzig
Journal:  Science       Date:  2014-10-23       Impact factor: 47.728

9.  Intact-Brain Analyses Reveal Distinct Information Carried by SNc Dopamine Subcircuits.

Authors:  Talia N Lerner; Carrie Shilyansky; Thomas J Davidson; Kathryn E Evans; Kevin T Beier; Kelly A Zalocusky; Ailey K Crow; Robert C Malenka; Liqun Luo; Raju Tomer; Karl Deisseroth
Journal:  Cell       Date:  2015-07-30       Impact factor: 41.582

10.  Simultaneous imaging of neural activity in three dimensions.

Authors:  Sean Quirin; Jesse Jackson; Darcy S Peterka; Rafael Yuste
Journal:  Front Neural Circuits       Date:  2014-04-03       Impact factor: 3.492

View more
  72 in total

1.  Fast, volumetric live-cell imaging using high-resolution light-field microscopy.

Authors:  Haoyu Li; Changliang Guo; Deborah Kim-Holzapfel; Weiyi Li; Yelena Altshuller; Bryce Schroeder; Wenhao Liu; Yizhi Meng; Jarrod B French; Ken-Ichi Takamaru; Michael A Frohman; Shu Jia
Journal:  Biomed Opt Express       Date:  2018-12-04       Impact factor: 3.732

2.  Quantifying three-dimensional rodent retina vascular development using optical tissue clearing and light-sheet microscopy.

Authors:  Jasmine N Singh; Taylor M Nowlin; Gregory J Seedorf; Steven H Abman; Douglas P Shepherd
Journal:  J Biomed Opt       Date:  2017-07-01       Impact factor: 3.170

Review 3.  Light sheet approaches for improved precision in 3D localization-based super-resolution imaging in mammalian cells [Invited].

Authors:  Anna-Karin Gustavsson; Petar N Petrov; W E Moerner
Journal:  Opt Express       Date:  2018-05-14       Impact factor: 3.894

4.  An interactive framework for whole-brain maps at cellular resolution.

Authors:  Daniel Fürth; Thomas Vaissière; Ourania Tzortzi; Yang Xuan; Antje Märtin; Iakovos Lazaridis; Giada Spigolon; Gilberto Fisone; Raju Tomer; Karl Deisseroth; Marie Carlén; Courtney A Miller; Gavin Rumbaugh; Konstantinos Meletis
Journal:  Nat Neurosci       Date:  2017-12-04       Impact factor: 24.884

Review 5.  Probing forebrain to hindbrain circuit functions in Xenopus.

Authors:  Darcy B Kelley; Taffeta M Elliott; Ben J Evans; Ian C Hall; Elizabeth C Leininger; Heather J Rhodes; Ayako Yamaguchi; Erik Zornik
Journal:  Genesis       Date:  2017-01       Impact factor: 2.487

Review 6.  Advanced microscopy to elucidate cardiovascular injury and regeneration: 4D light-sheet imaging.

Authors:  Kyung In Baek; Yichen Ding; Chih-Chiang Chang; Megan Chang; René R Sevag Packard; Jeffrey J Hsu; Peng Fei; Tzung K Hsiai
Journal:  Prog Biophys Mol Biol       Date:  2018-05-09       Impact factor: 3.667

7.  Motion quantification during multi-photon functional imaging in behaving animals.

Authors:  Lingjie Kong; Justin P Little; Meng Cui
Journal:  Biomed Opt Express       Date:  2016-08-26       Impact factor: 3.732

Review 8.  Genetically encoded indicators of neuronal activity.

Authors:  Michael Z Lin; Mark J Schnitzer
Journal:  Nat Neurosci       Date:  2016-08-26       Impact factor: 24.884

Review 9.  Dopaminergic dysfunction in neurodevelopmental disorders: recent advances and synergistic technologies to aid basic research.

Authors:  J Elliott Robinson; Viviana Gradinaru
Journal:  Curr Opin Neurobiol       Date:  2017-08-30       Impact factor: 6.627

10.  Calcium imaging of neural circuits with extended depth-of-field light-sheet microscopy.

Authors:  Sean Quirin; Nikita Vladimirov; Chao-Tsung Yang; Darcy S Peterka; Rafael Yuste; Misha B Ahrens
Journal:  Opt Lett       Date:  2016-03-01       Impact factor: 3.776

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.