Literature DB >> 2667995

The third ribosomal tRNA-binding site, the E site, is occupied in native polysomes.

J Remme1, T Margus, R Villems, K H Nierhaus.   

Abstract

The nucleic acids of Escherichia coli cells were uniformly labelled with 32P by growing the cells in [32P]orthophosphoric acid for about four generations. The cells were harvested in the logarithmic phase, resuspended in a buffer containing 6 mM Mg2+, 150 mM NH4+ and polyamines and incubated for 3 min at 37 degrees C in the presence of 3H-labelled amino acids. This procedure preferentially labels growing peptidyl chains. Polysomes were isolated, the fraction in the post-translocational state was assessed by a puromycin reaction and the tRNA content/70S ribosome was quantified in comparison to the amount of 5S rRNA determined after separation by gel electrophoresis. The data revealed that at least 75% of post-translocational ribosomes in isolated native polysomes carry a tRNA in their E site. The results are consistent with the allosteric three-site model for the elongation cycle but disagree with the two-site model.

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Year:  1989        PMID: 2667995     DOI: 10.1111/j.1432-1033.1989.tb14925.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  17 in total

1.  Ribosomal protein L2 is involved in the association of the ribosomal subunits, tRNA binding to A and P sites and peptidyl transfer.

Authors:  G Diedrich; C M Spahn; U Stelzl; M A Schäfer; T Wooten; D E Bochkariov; B S Cooperman; R R Traut; K H Nierhaus
Journal:  EMBO J       Date:  2000-10-02       Impact factor: 11.598

Review 2.  The accuracy of aminoacylation--ensuring the fidelity of the genetic code.

Authors:  D Söll
Journal:  Experientia       Date:  1990-12-01

Review 3.  Mechanism of recycling of post-termination ribosomal complexes in eubacteria: a new role of initiation factor 3.

Authors:  Anuradha Seshadri; Umesh Varshney
Journal:  J Biosci       Date:  2006-06       Impact factor: 1.826

4.  Genetic analysis of the E site during RF2 programmed frameshifting.

Authors:  Christina L Sanders; James F Curran
Journal:  RNA       Date:  2007-07-27       Impact factor: 4.942

5.  Shine-Dalgarno interaction prevents incorporation of noncognate amino acids at the codon following the AUG.

Authors:  Viviana Di Giacco; Viter Márquez; Yan Qin; Markus Pech; Francisco J Triana-Alonso; Daniel N Wilson; Knud H Nierhaus
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-30       Impact factor: 11.205

Review 6.  EF-G and EF4: translocation and back-translocation on the bacterial ribosome.

Authors:  Hiroshi Yamamoto; Yan Qin; John Achenbach; Chengmin Li; Jaroslaw Kijek; Christian M T Spahn; Knud H Nierhaus
Journal:  Nat Rev Microbiol       Date:  2013-12-23       Impact factor: 60.633

7.  Are the current three-site models valid descriptions of the ribosomal elongation cycle?

Authors:  K H Nierhaus; R Jünemann; C M Spahn
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-30       Impact factor: 11.205

8.  Functional implications of ribosomal protein L2 in protein biosynthesis as shown by in vivo replacement studies.

Authors:  M Uhlein; W Weglöhner; H Urlaub; B Wittmann-Liebold
Journal:  Biochem J       Date:  1998-04-15       Impact factor: 3.857

9.  A new mutation in 16S rRNA of Escherichia coli conferring spectinomycin resistance.

Authors:  U Johanson; D Hughes
Journal:  Nucleic Acids Res       Date:  1995-02-11       Impact factor: 16.971

10.  The topography of the 3'-terminal region of Escherichia coli 16S ribosomal RNA; an intra-RNA cross-linking study.

Authors:  T Döring; B Greuer; R Brimacombe
Journal:  Nucleic Acids Res       Date:  1992-04-11       Impact factor: 16.971

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