| Literature DB >> 26672604 |
Changcheng Shi1,2, Wei Yan1, Gang Wang1, Fei Wang1,2, Qingyu Li1, Nengming Lin1,2,3,4.
Abstract
BACKGROUND: Recently, using the patient's genotype to guide warfarin dosing has gained interest; however, whether pharmacogenetics-based dosing (PD) improves clinical outcomes compared to conventional dosing (CD) remains unclear. Thus, we performed a meta-analysis to evaluate these two strategies.Entities:
Mesh:
Substances:
Year: 2015 PMID: 26672604 PMCID: PMC4682655 DOI: 10.1371/journal.pone.0144511
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Search strategy used in PubMed database.
| Search number | Search query |
|---|---|
| #1 | randomized controlled trial [pt] |
| #2 | controlled clinical trial [pt] |
| #3 | randomized [tiab] |
| #4 | placebo [tiab] |
| #5 | drug therapy [sh] |
| #6 | randomly [tiab] |
| #7 | trail [tiab] |
| #8 | groups [tiab] |
| #9 | #1 OR #2 OR #3 OR #4 OR #5 OR #6 OR #7 OR #8 |
| #10 | animal [mh] NOT humans [mh] |
| #11 | #9 NOT #10 |
| #12 | genotype [mh] |
| #13 | genes [mh] |
| #14 | alleles [mh] |
| #15 | polymorphism [mh] |
| #16 | genetic [mh] |
| #17 | pharmacogenetics [mh] |
| #18 | genomics [mh] |
| #19 | single nucleotide |
| #20 | pharmacogenomics |
| #21 | #12 OR #13 OR #14 OR #15 OR #16 OR #17 OR #18 OR #19 OR #20 |
| #22 | warfarin [mh] |
| #23 | anticoagulants [mh] |
| #24 | coumarin |
| #25 | #22 OR #23 OR #24 |
| #26 | #11 AND #21 AND #25 |
Fig 1Flow diagram of the literature search and selection process.
Characteristics of RCTs included in the meta-analysis.
| Source | Location | Target INR | Genotypes used | Indication | Follow-up | Sample size | Male % | Mean age | Race White% | Dosing method | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PD | CD | PD | CD | PD | CD | PD | CD | |||||||
| Anderson 2007 [ | USA | 2–3 | CYP2C9, VKORC1 | PO, DVT, PE, AF, other | 3 mo | 101 | 99 | 49.5 | 56.6 | 63.2 | 58.9 | 94.1 | 94.9 | PD: regression equation [ |
| Borgman 2012 [ | USA | 1.8–3.2 | CYP2C9,VKORC1 | AF, DVT, stroke, other | 12 wk | 13 | 13 | 54 | 54 | 59 | 45 | 100 | 85 | PD: PerMIT-guided method [ |
| Burmester 2011 [ | USA | 2–3.5 | CYP2C9,VKORC1,CYP4F2 | arrhythmia, VTE, PV | 60 d | 115 | 115 | 57 | 61 | 67.4 | 69.2 | 100 | 100 | PD: Marshfield models; CD: guidelines described by Ansell et al [ |
| Caraco 2008 [ | Israel | 2–3 | CYP2C9 | DVT, PE, AF | NA | 95 | 96 | 48.4 | 43.8 | 57.6 | 59.7 | NA | NA | PD: guided by 6 different CYP2C9 genotype-adjusted algorithms; CD: algorithm described by Ageno et al [ |
| Hillman 2005 [ | USA | NA | CYP2C9 | AF, PV, PJ, DVT, PE, other | 4 wk | 18 | 20 | 44 | 45 | 68.8 | 70.5 | 100 | 100 | PD: published multivariate model [ |
| Huang 2009 [ | China | 1.8–3 | CYP2C9,VKORC1 | HV | 50 d | 61 | 60 | 32.8 | 30 | 41.6 | 43 | NA | NA | PD: dosing algorithm developed by authors; CD: 2.5 mg/day |
Characteristics of RCTs included in the meta-analysis (Cont).
| Source | Location | Target INR | Genotypes used | Indication | Follow-up | Sample size | Male % | Mean age | Race White% | Dosing method | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PD | CD | PD | CD | PD | CD | PD | CD | |||||||
| Jonas 2013 [ | USA | 2–3 or 2.5–3.5 | CYP2C9, VKORC1 | AF, DVT, PE, HV, other | 90 d | 55 | 54 | 43.6 | 50 | 59 | 55.3 | 80 | 64.8 | PD: algorithm developed at the Washington University [ |
| Kimmel 2013 [ | USA | 2–3 | CYP2C9, VKORC1 | DVT, PE, AF, other | 28 d | 514 | 501 | 53 | 49 | 59 | 57 | 67 | 66 | PD: algorithms included clinical variables and genotype data [ |
| Li 2013 [ | China | 2–3 | CYP2C9, VKORC1 | PE | 50 d | 97 | 95 | 39.2 | 40 | 61.6 | 60.1 | 0 | 0 | PD: algorithm developed by authors [ |
| Pirmohamed 2013 [ | UK and Sweden | 2–3 | CYP2C9, VKORC1 | VTE, AF | 3 mo | 227 | 228 | 63.9 | 57.9 | 67.8 | 66.9 | 97.8 | 98.7 | PD: a loading-dose algorithm [ |
| Wang 2012 [ | China | 1.8–3 | CYP2C9, VKORC1 | HV | 50 d | 50 | 51 | 30 | 31.4 | 41.9 | 42.8 | 0 | 0 | PD: With reference to the literature [ |
PO = Preoperative orthopedic; DVT = deep vein thrombosis; PE = pulmonary embolism; AF = atrial fibrillation; VTE = venous thromboembolism; PV = prosthetic valve; PJ = prosthetic joint; HV: Heart valves; PD = pharmacogenetics-based dosing; CD = conventional dosing; NR = not reported; INR = international normalized
Cochrane assessment of bias risk of RCTs.
| Andersonn 2007 [ | Borgman 2012 [ | Burmester 2011 [ | Caraco 2008 [ | Hillmann 2005 [ | Huang 2009 [ | Jonas 2013 [ | Kimmel 2013 [ | Li 2013 [ | Pirmohamed 2013 [ | Wang 2012 [ | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Random sequence generation | Unclear | Unclear | Low | High | Low | Unclear | Low | Unclear | Low | Low | Low |
| Allocation concealment | Low | Unclear | Low | Unclear | Low | Unclear | Low | Unclear | Unclear | Unclear | Unclear |
| Blinding of participants and personnel | Low | High | High | Unclear | High | Unclear | Low | Low | High | High | Unclear |
| Blinding of outcome assessment | Low | Unclear | Unclear | Unclear | High | Unclear | Low | Low | High | High | Unclear |
| Incomplete outcome data | Low | High | High | Low | Low | Low | Low | Low | Low | Low | Low |
| Selective reporting | Low | Unclear | High | Unclear | Unclear | Low | Low | Low | Unclear | Low | Low |
| Other bias | Low | Unclear | Low | Unclear | Unclear | Low | Low | Low | Unclear | Low | Low |
Fig 2Forest plot of the time within therapeutic range (TTR).
Fig 3Forest plot of an INR greater than 4.
Fig 4Forest plot of the time to maintenance dose.
Fig 5Forest plot of the time to first therapeutic INR.
Fig 6Forest plot of adverse events.
Fig 7Forest plot of major bleeding.
Fig 8Forest plot of thromboembolism.
Fig 9Forest plot of all-cause mortality.
Sensitivity analysis of time within therapeutic range.
| Study omitted | No. of patients | MD (95% Cl) | I2 |
|---|---|---|---|
| largest trial [ | 955 | 4.96 (-0.57, 10.49) | 81% |
| large trials [ | 1382 | 4.48 (-2.55, 11.51) | 83% |
| small trials [ | 64 | 4.22 (-1.11, 9.56) | 86% |
| high risk of bias ≥ 2 items [ | 716 | 4.83 (-3.21, 12.86) | 89% |
| including patients with heart valves mainly [ | 121 | 3.20 (-1.74, 8.13) | 81% |
| using CYP2C9, VKORC1 and CYP4F2 testing [ | 225 | 5.17 (-0.09, 10.44) | 81% |
MD = mean difference; CI = confidence interval.