Literature DB >> 26656162

Post-licensing Specification of Eukaryotic Replication Origins by Facilitated Mcm2-7 Sliding along DNA.

Julien Gros1, Charanya Kumar1, Gerard Lynch1, Tejas Yadav2, Iestyn Whitehouse1, Dirk Remus3.   

Abstract

Eukaryotic genomes are replicated from many origin sites that are licensed by the loading of the replicative DNA helicase, Mcm2-7. How eukaryotic origin positions are specified remains elusive. Here we show that, contrary to the bacterial paradigm, eukaryotic replication origins are not irrevocably defined by selection of the helicase loading site, but can shift in position after helicase loading. Using purified proteins we show that DNA translocases, including RNA polymerase, can push budding yeast Mcm2-7 double hexamers along DNA. Displaced Mcm2-7 double hexamers support DNA replication initiation distal to the loading site in vitro. Similarly, in yeast cells that are defective for transcription termination, collisions with RNA polymerase induce a redistribution of Mcm2-7 complexes along the chromosomes, resulting in a corresponding shift in DNA replication initiation sites. These results reveal a eukaryotic origin specification mechanism that departs from the classical replicon model, helping eukaryotic cells to negotiate transcription-replication conflict.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 26656162      PMCID: PMC4680849          DOI: 10.1016/j.molcel.2015.10.022

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  58 in total

1.  Reversion of autonomously replicating sequence mutations in Saccharomyces cerevisiae: creation of a eucaryotic replication origin within procaryotic vector DNA.

Authors:  D Kipling; S E Kearsey
Journal:  Mol Cell Biol       Date:  1990-01       Impact factor: 4.272

2.  Replication initiates at multiple locations on an autonomously replicating plasmid in human cells.

Authors:  P J Krysan; M P Calos
Journal:  Mol Cell Biol       Date:  1991-03       Impact factor: 4.272

3.  Isolation and characterisation of a yeast chromosomal replicator.

Authors:  D T Stinchcomb; K Struhl; R W Davis
Journal:  Nature       Date:  1979-11-01       Impact factor: 49.962

4.  Transition in specification of embryonic metazoan DNA replication origins.

Authors:  O Hyrien; C Maric; M Méchali
Journal:  Science       Date:  1995-11-10       Impact factor: 47.728

5.  Transcription through the yeast origin of replication ARS1 ends at the ABFI binding site and affects extrachromosomal maintenance of minichromosomes.

Authors:  S Tanaka; D Halter; M Livingstone-Zatchej; B Reszel; F Thoma
Journal:  Nucleic Acids Res       Date:  1994-09-25       Impact factor: 16.971

6.  Two steps in the assembly of complexes at yeast replication origins in vivo.

Authors:  J F Diffley; J H Cocker; S J Dowell; A Rowley
Journal:  Cell       Date:  1994-07-29       Impact factor: 41.582

7.  The units of DNA replication in Drosophila melanogaster chromosomes.

Authors:  A B Blumenthal; H J Kriegstein; D S Hogness
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1974

8.  Regulated replication of DNA microinjected into eggs of Xenopus laevis.

Authors:  R M Harland; R A Laskey
Journal:  Cell       Date:  1980-10       Impact factor: 41.582

9.  Transcription interferes with elements important for chromosome maintenance in Saccharomyces cerevisiae.

Authors:  M Snyder; R J Sapolsky; R W Davis
Journal:  Mol Cell Biol       Date:  1988-05       Impact factor: 4.272

10.  Extensive transcriptional heterogeneity revealed by isoform profiling.

Authors:  Vicent Pelechano; Wu Wei; Lars M Steinmetz
Journal:  Nature       Date:  2013-04-24       Impact factor: 49.962

View more
  50 in total

Review 1.  The impact of replication stress on replication dynamics and DNA damage in vertebrate cells.

Authors:  Hervé Técher; Stéphane Koundrioukoff; Alain Nicolas; Michelle Debatisse
Journal:  Nat Rev Genet       Date:  2017-07-17       Impact factor: 53.242

Review 2.  Mechanisms and regulation of DNA replication initiation in eukaryotes.

Authors:  Matthew W Parker; Michael R Botchan; James M Berger
Journal:  Crit Rev Biochem Mol Biol       Date:  2017-01-17       Impact factor: 8.250

Review 3.  Transcription-replication conflicts at chromosomal fragile sites-consequences in M phase and beyond.

Authors:  Vibe H Oestergaard; Michael Lisby
Journal:  Chromosoma       Date:  2016-10-28       Impact factor: 4.316

4.  ORChestrating the human DNA replication program.

Authors:  David M MacAlpine
Journal:  Proc Natl Acad Sci U S A       Date:  2016-08-05       Impact factor: 11.205

5.  Chromatin Constrains the Initiation and Elongation of DNA Replication.

Authors:  Sujan Devbhandari; Jieqing Jiang; Charanya Kumar; Iestyn Whitehouse; Dirk Remus
Journal:  Mol Cell       Date:  2016-12-15       Impact factor: 17.970

6.  Bayesian inference of origin firing time distributions, origin interference and licencing probabilities from Next Generation Sequencing data.

Authors:  Alina Bazarova; Conrad A Nieduszynski; Ildem Akerman; Nigel J Burroughs
Journal:  Nucleic Acids Res       Date:  2019-03-18       Impact factor: 16.971

7.  Both DNA Polymerases δ and ε Contact Active and Stalled Replication Forks Differently.

Authors:  Chuanhe Yu; Haiyun Gan; Zhiguo Zhang
Journal:  Mol Cell Biol       Date:  2017-10-13       Impact factor: 4.272

Review 8.  How and why multiple MCMs are loaded at origins of DNA replication.

Authors:  Shankar P Das; Nicholas Rhind
Journal:  Bioessays       Date:  2016-05-13       Impact factor: 4.345

Review 9.  The Temporal Regulation of S Phase Proteins During G1.

Authors:  Gavin D Grant; Jeanette G Cook
Journal:  Adv Exp Med Biol       Date:  2017       Impact factor: 2.622

10.  Dual Roles of Poly(dA:dT) Tracts in Replication Initiation and Fork Collapse.

Authors:  Anthony Tubbs; Sriram Sridharan; Niek van Wietmarschen; Yaakov Maman; Elsa Callen; Andre Stanlie; Wei Wu; Xia Wu; Amanda Day; Nancy Wong; Mianmian Yin; Andres Canela; Haiqing Fu; Christophe Redon; Steven C Pruitt; Yan Jaszczyszyn; Mirit I Aladjem; Peter D Aplan; Olivier Hyrien; André Nussenzweig
Journal:  Cell       Date:  2018-08-02       Impact factor: 41.582

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.