Literature DB >> 28094588

Mechanisms and regulation of DNA replication initiation in eukaryotes.

Matthew W Parker1, Michael R Botchan2, James M Berger1.   

Abstract

Cellular DNA replication is initiated through the action of multiprotein complexes that recognize replication start sites in the chromosome (termed origins) and facilitate duplex DNA melting within these regions. In a typical cell cycle, initiation occurs only once per origin and each round of replication is tightly coupled to cell division. To avoid aberrant origin firing and re-replication, eukaryotes tightly regulate two events in the initiation process: loading of the replicative helicase, MCM2-7, onto chromatin by the origin recognition complex (ORC), and subsequent activation of the helicase by its incorporation into a complex known as the CMG. Recent work has begun to reveal the details of an orchestrated and sequential exchange of initiation factors on DNA that give rise to a replication-competent complex, the replisome. Here, we review the molecular mechanisms that underpin eukaryotic DNA replication initiation - from selecting replication start sites to replicative helicase loading and activation - and describe how these events are often distinctly regulated across different eukaryotic model organisms.

Entities:  

Keywords:  CMG; Cdc6; Cdt1; DNA replication; MCM2-7; ORC; helicase; initiator

Mesh:

Substances:

Year:  2017        PMID: 28094588      PMCID: PMC5545932          DOI: 10.1080/10409238.2016.1274717

Source DB:  PubMed          Journal:  Crit Rev Biochem Mol Biol        ISSN: 1040-9238            Impact factor:   8.250


  498 in total

Review 1.  In search of the holy replicator.

Authors:  David M Gilbert
Journal:  Nat Rev Mol Cell Biol       Date:  2004-10       Impact factor: 94.444

2.  Polymorphism and double hexamer structure in the archaeal minichromosome maintenance (MCM) helicase from Methanobacterium thermoautotrophicum.

Authors:  Yacob Gómez-Llorente; Ryan J Fletcher; Xiaojiang S Chen; José M Carazo; Carmen San Martín
Journal:  J Biol Chem       Date:  2005-10-11       Impact factor: 5.157

3.  Molecular anatomy and regulation of a stable replisome at a paused eukaryotic DNA replication fork.

Authors:  Arturo Calzada; Ben Hodgson; Masato Kanemaki; Avelino Bueno; Karim Labib
Journal:  Genes Dev       Date:  2005-08-15       Impact factor: 11.361

4.  Molecular determinants of origin discrimination by Orc1 initiators in archaea.

Authors:  Erin C Dueber; Alessandro Costa; Jacob E Corn; Stephen D Bell; James M Berger
Journal:  Nucleic Acids Res       Date:  2011-01-11       Impact factor: 16.971

5.  Cyclin-dependent kinases phosphorylate human Cdt1 and induce its degradation.

Authors:  Enbo Liu; Xianghong Li; Feng Yan; Qiping Zhao; Xiaohua Wu
Journal:  J Biol Chem       Date:  2004-03-05       Impact factor: 5.157

6.  Identification of a heteromeric complex that promotes DNA replication origin firing in human cells.

Authors:  Dominik Boos; Mona Yekezare; John F X Diffley
Journal:  Science       Date:  2013-05-24       Impact factor: 47.728

7.  The origin recognition complex in silencing, cell cycle progression, and DNA replication.

Authors:  S Loo; C A Fox; J Rine; R Kobayashi; B Stillman; S Bell
Journal:  Mol Biol Cell       Date:  1995-06       Impact factor: 4.138

8.  Multiple mechanisms contribute to Schizosaccharomyces pombe origin recognition complex-DNA interactions.

Authors:  Christopher R Houchens; Wenyan Lu; Ray-Yuan Chuang; Mark G Frattini; Alex Fuller; Pam Simancek; Thomas J Kelly
Journal:  J Biol Chem       Date:  2008-08-22       Impact factor: 5.157

9.  Identification of amino acids important for the biochemical activity of Methanothermobacter thermautotrophicus MCM.

Authors:  Ryan J Fletcher; Jingping Shen; Lauren G Holden; Xiaojiang S Chen
Journal:  Biochemistry       Date:  2008-08-29       Impact factor: 3.162

10.  Cdc6-induced conformational changes in ORC bound to origin DNA revealed by cryo-electron microscopy.

Authors:  Jingchuan Sun; Hironori Kawakami; Juergen Zech; Christian Speck; Bruce Stillman; Huilin Li
Journal:  Structure       Date:  2012-03-07       Impact factor: 5.006

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  67 in total

1.  Genome wide decrease of DNA replication eye density at the midblastula transition of Xenopus laevis.

Authors:  Marie Platel; Hemalatha Narassimprakash; Diletta Ciardo; Olivier Haccard; Kathrin Marheineke
Journal:  Cell Cycle       Date:  2019-05-26       Impact factor: 4.534

2.  DNA Damage Response in Xenopus laevis Cell-Free Extracts.

Authors:  Tomas Aparicio Casado; Jean Gautier
Journal:  Methods Mol Biol       Date:  2021

Review 3.  Preparation for DNA replication: the key to a successful S phase.

Authors:  Juanita C Limas; Jeanette Gowen Cook
Journal:  FEBS Lett       Date:  2019-10-15       Impact factor: 4.124

Review 4.  The Eukaryotic CMG Helicase at the Replication Fork: Emerging Architecture Reveals an Unexpected Mechanism.

Authors:  Huilin Li; Michael E O'Donnell
Journal:  Bioessays       Date:  2018-02-06       Impact factor: 4.345

5.  Study of the Ability of the gypsy Insulator to Stabilize Amplification of the chorion Replication Origin of Drosophila melanogaster.

Authors:  O G Maksimenko; E V Belova; P G Georgiev
Journal:  Dokl Biochem Biophys       Date:  2018-07-14       Impact factor: 0.788

6.  CDC6 is up-regulated and a poor prognostic signature in glioblastoma multiforme.

Authors:  H Zhao; X Zhou; G Yuan; Z Hou; H Sun; N Zhai; B Huang; X Li
Journal:  Clin Transl Oncol       Date:  2020-07-13       Impact factor: 3.405

7.  A new class of disordered elements controls DNA replication through initiator self-assembly.

Authors:  Matthew W Parker; Maren Bell; Mustafa Mir; Jonchee A Kao; Xavier Darzacq; Michael R Botchan; James M Berger
Journal:  Elife       Date:  2019-09-27       Impact factor: 8.140

8.  Mitotic DNA Synthesis Is Differentially Regulated between Cancer and Noncancerous Cells.

Authors:  Cari L Graber-Feesl; Kayla D Pederson; Katherine J Aney; Naoko Shima
Journal:  Mol Cancer Res       Date:  2019-05-21       Impact factor: 5.852

9.  Mechanisms of opening and closing of the bacterial replicative helicase.

Authors:  Jillian Chase; Andrew Catalano; Alex J Noble; Edward T Eng; Paul Db Olinares; Kelly Molloy; Danaya Pakotiprapha; Martin Samuels; Brian Chait; Amedee des Georges; David Jeruzalmi
Journal:  Elife       Date:  2018-12-24       Impact factor: 8.140

10.  Rapid DNA Synthesis During Early Drosophila Embryogenesis Is Sensitive to Maternal Humpty Dumpty Protein Function.

Authors:  Shera Lesly; Jennifer L Bandura; Brian R Calvi
Journal:  Genetics       Date:  2017-09-23       Impact factor: 4.562

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