Literature DB >> 26655900

Loss of BAF (mSWI/SNF) Complexes Causes Global Transcriptional and Chromatin State Changes in Forebrain Development.

Ramanathan Narayanan1, Mehdi Pirouz2, Cemil Kerimoglu3, Linh Pham1, Robin J Wagener1, Kamila A Kiszka1, Joachim Rosenbusch1, Rho H Seong4, Michael Kessel2, Andre Fischer5, Anastassia Stoykova6, Jochen F Staiger7, Tran Tuoc8.   

Abstract

BAF (Brg/Brm-associated factors) complexes play important roles in development and are linked to chromatin plasticity at selected genomic loci. Nevertheless, a full understanding of their role in development and chromatin remodeling has been hindered by the absence of mutants completely lacking BAF complexes. Here, we report that the loss of BAF155/BAF170 in double-conditional knockout (dcKO) mice eliminates all known BAF subunits, resulting in an overall reduction in active chromatin marks (H3K9Ac), a global increase in repressive marks (H3K27me2/3), and downregulation of gene expression. We demonstrate that BAF complexes interact with H3K27 demethylases (JMJD3 and UTX) and potentiate their activity. Importantly, BAF complexes are indispensable for forebrain development, including proliferation, differentiation, and cell survival of neural progenitor cells. Our findings reveal a molecular mechanism mediated by BAF complexes that controls the global transcriptional program and chromatin state in development.
Copyright © 2015 The Authors. Published by Elsevier Inc. All rights reserved.

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Year:  2015        PMID: 26655900     DOI: 10.1016/j.celrep.2015.10.046

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  49 in total

1.  RBM15 Modulates the Function of Chromatin Remodeling Factor BAF155 Through RNA Methylation in Developing Cortex.

Authors:  Yuanbin Xie; Ricardo Castro-Hernández; Godwin Sokpor; Linh Pham; Ramanathan Narayanan; Joachim Rosenbusch; Jochen F Staiger; Tran Tuoc
Journal:  Mol Neurobiol       Date:  2019-04-24       Impact factor: 5.590

2.  Acute BAF perturbation causes immediate changes in chromatin accessibility.

Authors:  Sandra Schick; Sarah Grosche; Katharina Eva Kohl; Danica Drpic; Martin G Jaeger; Nara C Marella; Hana Imrichova; Jung-Ming G Lin; Gerald Hofstätter; Michael Schuster; André F Rendeiro; Anna Koren; Mark Petronczki; Christoph Bock; André C Müller; Georg E Winter; Stefan Kubicek
Journal:  Nat Genet       Date:  2021-02-08       Impact factor: 38.330

3.  Epigenetic regulation by BAF (mSWI/SNF) chromatin remodeling complexes is indispensable for embryonic development.

Authors:  Huong Nguyen; Godwin Sokpor; Linh Pham; Joachim Rosenbusch; Anastassia Stoykova; Jochen F Staiger; Tran Tuoc
Journal:  Cell Cycle       Date:  2016-03-17       Impact factor: 4.534

Review 4.  ATP-dependent chromatin remodeling during mammalian development.

Authors:  Swetansu K Hota; Benoit G Bruneau
Journal:  Development       Date:  2016-08-15       Impact factor: 6.868

Review 5.  Epigenetic regulation of cortical neurogenesis; orchestrating fate switches at the right time and place.

Authors:  Manal A Adam; Corey C Harwell
Journal:  Curr Opin Neurobiol       Date:  2020-05-16       Impact factor: 6.627

6.  Expanding the Spectrum of BAF-Related Disorders: De Novo Variants in SMARCC2 Cause a Syndrome with Intellectual Disability and Developmental Delay.

Authors:  Keren Machol; Justine Rousseau; Sophie Ehresmann; Thomas Garcia; Thi Tuyet Mai Nguyen; Rebecca C Spillmann; Jennifer A Sullivan; Vandana Shashi; Yong-Hui Jiang; Nicholas Stong; Elise Fiala; Marcia Willing; Rolph Pfundt; Tjitske Kleefstra; Megan T Cho; Heather McLaughlin; Monica Rosello Piera; Carmen Orellana; Francisco Martínez; Alfonso Caro-Llopis; Sandra Monfort; Tony Roscioli; Cheng Yee Nixon; Michael F Buckley; Anne Turner; Wendy D Jones; Peter M van Hasselt; Floris C Hofstede; Koen L I van Gassen; Alice S Brooks; Marjon A van Slegtenhorst; Katherine Lachlan; Jessica Sebastian; Suneeta Madan-Khetarpal; Desai Sonal; Naidu Sakkubai; Julien Thevenon; Laurence Faivre; Alice Maurel; Slavé Petrovski; Ian D Krantz; Jennifer M Tarpinian; Jill A Rosenfeld; Brendan H Lee; Philippe M Campeau
Journal:  Am J Hum Genet       Date:  2018-12-20       Impact factor: 11.025

Review 7.  COMPASS and SWI/SNF complexes in development and disease.

Authors:  Bercin K Cenik; Ali Shilatifard
Journal:  Nat Rev Genet       Date:  2020-09-21       Impact factor: 53.242

8.  Exome sequencing implicates genetic disruption of prenatal neuro-gliogenesis in sporadic congenital hydrocephalus.

Authors:  Sheng Chih Jin; Weilai Dong; Adam J Kundishora; Shreyas Panchagnula; Andres Moreno-De-Luca; Charuta G Furey; August A Allocco; Rebecca L Walker; Carol Nelson-Williams; Hannah Smith; Ashley Dunbar; Sierra Conine; Qiongshi Lu; Xue Zeng; Michael C Sierant; James R Knight; William Sullivan; Phan Q Duy; Tyrone DeSpenza; Benjamin C Reeves; Jason K Karimy; Arnaud Marlier; Christopher Castaldi; Irina R Tikhonova; Boyang Li; Helena Perez Peña; James R Broach; Edith M Kabachelor; Peter Ssenyonga; Christine Hehnly; Li Ge; Boris Keren; Andrew T Timberlake; June Goto; Francesco T Mangano; James M Johnston; William E Butler; Benjamin C Warf; Edward R Smith; Steven J Schiff; David D Limbrick; Gregory Heuer; Eric M Jackson; Bermans J Iskandar; Shrikant Mane; Shozeb Haider; Bulent Guclu; Yasar Bayri; Yener Sahin; Charles C Duncan; Michael L J Apuzzo; Michael L DiLuna; Ellen J Hoffman; Nenad Sestan; Laura R Ment; Seth L Alper; Kaya Bilguvar; Daniel H Geschwind; Murat Günel; Richard P Lifton; Kristopher T Kahle
Journal:  Nat Med       Date:  2020-10-19       Impact factor: 53.440

Review 9.  Unwinding chromatin at the right places: how BAF is targeted to specific genomic locations during development.

Authors:  Patric J Ho; Sarah M Lloyd; Xiaomin Bao
Journal:  Development       Date:  2019-09-30       Impact factor: 6.868

Review 10.  Transcriptional and Epigenetic Control of Mammalian Olfactory Epithelium Development.

Authors:  Godwin Sokpor; Eman Abbas; Joachim Rosenbusch; Jochen F Staiger; Tran Tuoc
Journal:  Mol Neurobiol       Date:  2018-03-12       Impact factor: 5.590

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