Literature DB >> 26645456

Maize reas1 Mutant Stimulates Ribosome Use Efficiency and Triggers Distinct Transcriptional and Translational Responses.

Weiwei Qi1, Jie Zhu1, Qiao Wu1, Qun Wang1, Xia Li1, Dongsheng Yao1, Ying Jin1, Gang Wang1, Guifeng Wang1, Rentao Song2.   

Abstract

Ribosome biogenesis is a fundamental cellular process in all cells. Impaired ribosome biogenesis causes developmental defects; however, its molecular and cellular bases are not fully understood. We cloned a gene responsible for a maize (Zea mays) small seed mutant, dek* (for defective kernel), and found that it encodes Ribosome export associated1 (ZmReas1). Reas1 is an AAA-ATPase that controls 60S ribosome export from the nucleus to the cytoplasm after ribosome maturation. dek* is a weak mutant allele with decreased Reas1 function. In dek* cells, mature 60S ribosome subunits are reduced in the nucleus and cytoplasm, but the proportion of actively translating polyribosomes in cytosol is significantly increased. Reduced phosphorylation of eukaryotic initiation factor 2α and the increased elongation factor 1α level indicate an enhancement of general translational efficiency in dek* cells. The mutation also triggers dramatic changes in differentially transcribed genes and differentially translated RNAs. Discrepancy was observed between differentially transcribed genes and differentially translated RNAs, indicating distinct cellular responses at transcription and translation levels to the stress of defective ribosome processing. DNA replication and nucleosome assembly-related gene expression are selectively suppressed at the translational level, resulting in inhibited cell growth and proliferation in dek* cells. This study provides insight into cellular responses due to impaired ribosome biogenesis.
© 2016 American Society of Plant Biologists. All Rights Reserved.

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Year:  2015        PMID: 26645456      PMCID: PMC4734584          DOI: 10.1104/pp.15.01722

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  73 in total

Review 1.  An encore for ribosome biogenesis in the control of cell proliferation.

Authors:  G Thomas
Journal:  Nat Cell Biol       Date:  2000-05       Impact factor: 28.824

Review 2.  The economics of ribosome biosynthesis in yeast.

Authors:  J R Warner
Journal:  Trends Biochem Sci       Date:  1999-11       Impact factor: 13.807

3.  Identification of a 60S preribosomal particle that is closely linked to nuclear export.

Authors:  J Bassler; P Grandi; O Gadal; T Lessmann; E Petfalski; D Tollervey; J Lechner; E Hurt
Journal:  Mol Cell       Date:  2001-09       Impact factor: 17.970

4.  Selective translation of cytoplasmic mRNAs in plants.

Authors: 
Journal:  Trends Plant Sci       Date:  1999-04       Impact factor: 18.313

Review 5.  PKR; a sentinel kinase for cellular stress.

Authors:  B R Williams
Journal:  Oncogene       Date:  1999-11-01       Impact factor: 9.867

6.  Regulated translation initiation controls stress-induced gene expression in mammalian cells.

Authors:  H P Harding; I Novoa; Y Zhang; H Zeng; R Wek; M Schapira; D Ron
Journal:  Mol Cell       Date:  2000-11       Impact factor: 17.970

7.  Characterization of a mammalian homolog of the GCN2 eukaryotic initiation factor 2alpha kinase.

Authors:  J J Berlanga; J Santoyo; C De Haro
Journal:  Eur J Biochem       Date:  1999-10

8.  Genomics analysis of genes expressed in maize endosperm identifies novel seed proteins and clarifies patterns of zein gene expression.

Authors:  Y M Woo; D W Hu; B A Larkins; R Jung
Journal:  Plant Cell       Date:  2001-10       Impact factor: 11.277

9.  Sugar control of the plant cell cycle: differential regulation of Arabidopsis D-type cyclin gene expression.

Authors:  C Riou-Khamlichi; M Menges; J M Healy; J A Murray
Journal:  Mol Cell Biol       Date:  2000-07       Impact factor: 4.272

Review 10.  Ribosome synthesis in Saccharomyces cerevisiae.

Authors:  J Venema; D Tollervey
Journal:  Annu Rev Genet       Date:  1999       Impact factor: 16.830

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  21 in total

Review 1.  Ribosome Biogenesis in Plants: From Functional 45S Ribosomal DNA Organization to Ribosome Assembly Factors.

Authors:  Julio Sáez-Vásquez; Michel Delseny
Journal:  Plant Cell       Date:  2019-06-25       Impact factor: 11.277

2.  Maize Dek37 Encodes a P-type PPR Protein That Affects cis-Splicing of Mitochondrial nad2 Intron 1 and Seed Development.

Authors:  Dawei Dai; Shengchao Luan; Xiuzu Chen; Qun Wang; Yang Feng; Chenguang Zhu; Weiwei Qi; Rentao Song
Journal:  Genetics       Date:  2018-01-04       Impact factor: 4.562

3.  Mitochondrial Function and Maize Kernel Development Requires Dek2, a Pentatricopeptide Repeat Protein Involved in nad1 mRNA Splicing.

Authors:  Weiwei Qi; Yang Yang; Xuzhen Feng; Mingliang Zhang; Rentao Song
Journal:  Genetics       Date:  2016-11-04       Impact factor: 4.562

4.  Editing of Mitochondrial Transcripts nad3 and cox2 by Dek10 Is Essential for Mitochondrial Function and Maize Plant Development.

Authors:  Weiwei Qi; Zhongrui Tian; Lei Lu; Xiuzu Chen; Xinze Chen; Wei Zhang; Rentao Song
Journal:  Genetics       Date:  2017-02-17       Impact factor: 4.562

5.  Maize Dek44 Encodes Mitochondrial Ribosomal Protein L9 and Is Required for Seed Development.

Authors:  Weiwei Qi; Lei Lu; Shengchan Huang; Rentao Song
Journal:  Plant Physiol       Date:  2019-06-10       Impact factor: 8.340

6.  Dek40 Encodes a PBAC4 Protein Required for 20S Proteasome Biogenesis and Seed Development.

Authors:  Guifeng Wang; Wei Fan; Mingyan Ou; Xuewei Wang; Hongli Qin; Fan Feng; Yulong Du; Jiacheng Ni; Jihua Tang; Rentao Song; Gang Wang
Journal:  Plant Physiol       Date:  2019-06-12       Impact factor: 8.340

7.  OPAQUE11 Is a Central Hub of the Regulatory Network for Maize Endosperm Development and Nutrient Metabolism.

Authors:  Fan Feng; Weiwei Qi; Yuanda Lv; Shumei Yan; Liming Xu; Wenyao Yang; Yue Yuan; Yihan Chen; Han Zhao; Rentao Song
Journal:  Plant Cell       Date:  2018-02-07       Impact factor: 11.277

8.  Nucleolar stress and sugar response in plants.

Authors:  Shugo Maekawa; Shuichi Yanagisawa
Journal:  Plant Signal Behav       Date:  2018-03-13

9.  Maize Dek15 Encodes the Cohesin-Loading Complex Subunit SCC4 and Is Essential for Chromosome Segregation and Kernel Development.

Authors:  Yonghui He; Jinguang Wang; Weiwei Qi; Rentao Song
Journal:  Plant Cell       Date:  2019-01-31       Impact factor: 11.277

10.  A SnRK1-ZmRFWD3-Opaque2 Signaling Axis Regulates Diurnal Nitrogen Accumulation in Maize Seeds.

Authors:  Chaobin Li; Weiwei Qi; Zheng Liang; Xi Yang; Zeyang Ma; Rentao Song
Journal:  Plant Cell       Date:  2020-07-22       Impact factor: 11.277

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