Literature DB >> 29465318

Nucleolar stress and sugar response in plants.

Shugo Maekawa1, Shuichi Yanagisawa1.   

Abstract

The processes involved in ribosome biogenesis, including synthesis of ribosomal proteins, ribosome biogenesis-related factors, and ribosomal RNAs (rRNAs), must be coordinately orchestrated in response to changes in energy supply. In animal cells, defects in ribosome biogenesis induce a nucleolar stress response through the p53-mediated pathway. Our recent finding that an essential, sugar-inducible Arabidopsis gene, APUM24, encoded a pre-rRNA processing factor allowed the relationships between rRNA biogenesis, nucleolar stress, sugar response, and growth regulation to be understood in plants. A knockdown mutant of APUM24 developed sugar-dependent phenotypes including pre-rRNA processing defects, reductions in nucleolar size, and limited promotion of leaf and root growth. Alongside the absence of plant p53 homologs and the synchronous sugar-induced expression of ribosome biogenesis-related genes, these findings suggest the following hypothesis. Sugar supply may enhance ribosome biogenesis defects, leading to p53-independent induction of nucleolar stress responses that include negative regulation of growth and development in plants.

Entities:  

Keywords:  Ribosome biogenesis; nucleolar stress; ribosomal RNA; sugar

Mesh:

Substances:

Year:  2018        PMID: 29465318      PMCID: PMC5927710          DOI: 10.1080/15592324.2018.1442975

Source DB:  PubMed          Journal:  Plant Signal Behav        ISSN: 1559-2316


  24 in total

1.  Coordinated Ribosomal ITS2 RNA Processing by the Las1 Complex Integrating Endonuclease, Polynucleotide Kinase, and Exonuclease Activities.

Authors:  Lisa Gasse; Dirk Flemming; Ed Hurt
Journal:  Mol Cell       Date:  2015-12-03       Impact factor: 17.970

Review 2.  Plant-Specific Features of Ribosome Biogenesis.

Authors:  Benjamin L Weis; Jelena Kovacevic; Sandra Missbach; Enrico Schleiff
Journal:  Trends Plant Sci       Date:  2015-10-11       Impact factor: 18.313

Review 3.  Growth control and ribosome biogenesis.

Authors:  Harri Lempiäinen; David Shore
Journal:  Curr Opin Cell Biol       Date:  2009-09-30       Impact factor: 8.382

4.  An Arabidopsis divergent pumilio protein, APUM24, is essential for embryogenesis and required for faithful pre-rRNA processing.

Authors:  Thiruvenkadam Shanmugam; Nazia Abbasi; Hyung-Sae Kim; Ho Bang Kim; Nam-Il Park; Guen Tae Park; Sung Aeong Oh; Soon Ki Park; Douglas G Muench; Yeonhee Choi; Youn-Il Park; Sang-Bong Choi
Journal:  Plant J       Date:  2017-11-20       Impact factor: 6.417

Review 5.  Ribosomal proteins: functions beyond the ribosome.

Authors:  Xiang Zhou; Wen-Juan Liao; Jun-Ming Liao; Peng Liao; Hua Lu
Journal:  J Mol Cell Biol       Date:  2015-03-03       Impact factor: 6.216

6.  The Puf family of RNA-binding proteins in plants: phylogeny, structural modeling, activity and subcellular localization.

Authors:  Patrick P C Tam; Isabelle H Barrette-Ng; Dawn M Simon; Michael W C Tam; Amanda L Ang; Douglas G Muench
Journal:  BMC Plant Biol       Date:  2010-03-09       Impact factor: 4.215

7.  Molecular characterization of Arabidopsis thaliana PUF proteins--binding specificity and target candidates.

Authors:  Carlos W Francischini; Ronaldo B Quaggio
Journal:  FEBS J       Date:  2009-08-13       Impact factor: 5.542

8.  Suppressor of gamma response 1 (SOG1) encodes a putative transcription factor governing multiple responses to DNA damage.

Authors:  Kaoru Yoshiyama; Phillip A Conklin; Neil D Huefner; Anne B Britt
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-19       Impact factor: 11.205

Review 9.  An overview of pre-ribosomal RNA processing in eukaryotes.

Authors:  Anthony K Henras; Célia Plisson-Chastang; Marie-Françoise O'Donohue; Anirban Chakraborty; Pierre-Emmanuel Gleizes
Journal:  Wiley Interdiscip Rev RNA       Date:  2014-10-27       Impact factor: 9.957

10.  The histone demethylase JMJD2A/KDM4A links ribosomal RNA transcription to nutrients and growth factors availability.

Authors:  Kader Salifou; Swagat Ray; Laure Verrier; Marion Aguirrebengoa; Didier Trouche; Konstantin I Panov; Marie Vandromme
Journal:  Nat Commun       Date:  2016-01-05       Impact factor: 14.919

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  6 in total

Review 1.  Ribosome Biogenesis in Plants: From Functional 45S Ribosomal DNA Organization to Ribosome Assembly Factors.

Authors:  Julio Sáez-Vásquez; Michel Delseny
Journal:  Plant Cell       Date:  2019-06-25       Impact factor: 11.277

2.  Ribosome biogenesis factor OLI2 and its interactor BRX1-2 are associated with morphogenesis and lifespan extension in Arabidopsis thaliana.

Authors:  Shugo Maekawa; Shuichi Yanagisawa
Journal:  Plant Biotechnol (Tokyo)       Date:  2021-03-25       Impact factor: 1.133

3.  Structural and functional similarities and differences in nucleolar Pumilio RNA-binding proteins between Arabidopsis and the charophyte Chara corallina.

Authors:  Su Hyun Park; Hyung-Sae Kim; Prakash Jyoti Kalita; Sang-Bong Choi
Journal:  BMC Plant Biol       Date:  2020-05-24       Impact factor: 4.215

4.  High levels of glucose alter Physcomitrella patens metabolism and trigger a differential proteomic response.

Authors:  Alejandra Chamorro-Flores; Axel Tiessen-Favier; Josefat Gregorio-Jorge; Miguel Angel Villalobos-López; Ángel Arturo Guevara-García; Melina López-Meyer; Analilia Arroyo-Becerra
Journal:  PLoS One       Date:  2020-12-04       Impact factor: 3.240

5.  Methylome decoding of RdDM-mediated reprogramming effects in the Arabidopsis MSH1 system.

Authors:  Hardik Kundariya; Robersy Sanchez; Xiaodong Yang; Alenka Hafner; Sally A Mackenzie
Journal:  Genome Biol       Date:  2022-08-04       Impact factor: 17.906

6.  Spatially Enriched Paralog Rearrangements Argue Functionally Diverse Ribosomes Arise during Cold Acclimation in Arabidopsis.

Authors:  Federico Martinez-Seidel; Olga Beine-Golovchuk; Yin-Chen Hsieh; Kheloud El Eshraky; Michal Gorka; Bo-Eng Cheong; Erika V Jimenez-Posada; Dirk Walther; Aleksandra Skirycz; Ute Roessner; Joachim Kopka; Alexandre Augusto Pereira Firmino
Journal:  Int J Mol Sci       Date:  2021-06-07       Impact factor: 5.923

  6 in total

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