Literature DB >> 26606171

Theoretical and Experimental Investigation of Thermodynamics and Kinetics of Thiol-Michael Addition Reactions: A Case Study of Reversible Fluorescent Probes for Glutathione Imaging in Single Cells.

Jianwei Chen1, Xiqian Jiang1, Shaina Carroll1,2, Jia Huang3, Jin Wang1,4.   

Abstract

Density functional theory (DFT) was applied to study the thermodynamics and kinetics of reversible thiol-Michael addition reactions. M06-2X/6-31G(d) with the SMD solvation model can reliably predict the Gibbs free energy changes (ΔG) of thiol-Michael addition reactions with an error of less than 1 kcal·mol(-1) compared with the experimental benchmarks. Taking advantage of this computational model, the first reversible reaction-based fluorescent probe was developed that can monitor the changes in glutathione levels in single living cells.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 26606171      PMCID: PMC4727754          DOI: 10.1021/acs.orglett.5b02910

Source DB:  PubMed          Journal:  Org Lett        ISSN: 1523-7052            Impact factor:   6.005


  13 in total

1.  Self-Consistent Reaction Field Model for Aqueous and Nonaqueous Solutions Based on Accurate Polarized Partial Charges.

Authors:  Aleksandr V Marenich; Ryan M Olson; Casey P Kelly; Christopher J Cramer; Donald G Truhlar
Journal:  J Chem Theory Comput       Date:  2007-11       Impact factor: 6.006

2.  Critical evaluation and rate constants of chemoselective ligation reactions for stoichiometric conjugations in water.

Authors:  Fumito Saito; Hidetoshi Noda; Jeffrey W Bode
Journal:  ACS Chem Biol       Date:  2015-01-22       Impact factor: 5.100

3.  New protein kinase inhibitors in breast cancer: afatinib and neratinib.

Authors:  Xiaosong Zhang; Pamela N Munster
Journal:  Expert Opin Pharmacother       Date:  2014-04-30       Impact factor: 3.889

4.  Transition states and energetics of nucleophilic additions of thiols to substituted α,β-unsaturated ketones: substituent effects involve enone stabilization, product branching, and solvation.

Authors:  Elizabeth H Krenske; Russell C Petter; Zhendong Zhu; K N Houk
Journal:  J Org Chem       Date:  2011-05-16       Impact factor: 4.354

5.  Chemical and computational methods for the characterization of covalent reactive groups for the prospective design of irreversible inhibitors.

Authors:  Mark E Flanagan; Joseph A Abramite; Dennis P Anderson; Ann Aulabaugh; Upendra P Dahal; Adam M Gilbert; Chao Li; Justin Montgomery; Stacey R Oppenheimer; Tim Ryder; Brandon P Schuff; Daniel P Uccello; Gregory S Walker; Yan Wu; Matthew F Brown; Jinshan M Chen; Matthew M Hayward; Mark C Noe; R Scott Obach; Laurence Philippe; Veerabahu Shanmugasundaram; Michael J Shapiro; Jeremy Starr; Justin Stroh; Ye Che
Journal:  J Med Chem       Date:  2014-11-26       Impact factor: 7.446

6.  Ratiometric fluorescence imaging of cellular glutathione.

Authors:  Gun-Joong Kim; Kiwon Lee; Hyockman Kwon; Hae-Jo Kim
Journal:  Org Lett       Date:  2011-05-06       Impact factor: 6.005

7.  Free-energy surfaces for liquid-phase reactions and their use to study the border between concerted and nonconcerted alpha,beta-elimination reactions of esters and thioesters.

Authors:  Yongho Kim; Jerry R Mohrig; Donald G Truhlar
Journal:  J Am Chem Soc       Date:  2010-08-18       Impact factor: 15.419

8.  Influence of base and structure in the reversible covalent conjugate addition of thiol to polycyclic enone scaffolds.

Authors:  Christopher J Rosenker; Elizabeth H Krenske; K N Houk; Peter Wipf
Journal:  Org Lett       Date:  2013-02-13       Impact factor: 6.005

Review 9.  Reaction-based small-molecule fluorescent probes for chemoselective bioimaging.

Authors:  Jefferson Chan; Sheel C Dodani; Christopher J Chang
Journal:  Nat Chem       Date:  2012-12       Impact factor: 24.427

10.  Quantitative imaging of glutathione in live cells using a reversible reaction-based ratiometric fluorescent probe.

Authors:  Xiqian Jiang; Yong Yu; Jianwei Chen; Mingkun Zhao; Hui Chen; Xianzhou Song; Alexander J Matzuk; Shaina L Carroll; Xiao Tan; Antons Sizovs; Ninghui Cheng; Meng C Wang; Jin Wang
Journal:  ACS Chem Biol       Date:  2015-01-06       Impact factor: 5.100

View more
  11 in total

Review 1.  Challenges and Opportunities for Small-Molecule Fluorescent Probes in Redox Biology Applications.

Authors:  Xiqian Jiang; Lingfei Wang; Shaina L Carroll; Jianwei Chen; Meng C Wang; Jin Wang
Journal:  Antioxid Redox Signal       Date:  2018-02-16       Impact factor: 8.401

2.  Rational design of reversible fluorescent probes for live-cell imaging and quantification of fast glutathione dynamics.

Authors:  Keitaro Umezawa; Masafumi Yoshida; Mako Kamiya; Tatsuya Yamasoba; Yasuteru Urano
Journal:  Nat Chem       Date:  2016-11-07       Impact factor: 24.427

3.  Quantitative real-time imaging of glutathione.

Authors:  Xiqian Jiang; Jianwei Chen; Aleksandar Bajić; Chengwei Zhang; Xianzhou Song; Shaina L Carroll; Zhao-Lin Cai; Meiling Tang; Mingshan Xue; Ninghui Cheng; Christian P Schaaf; Feng Li; Kevin R MacKenzie; Allan Chris M Ferreon; Fan Xia; Meng C Wang; Mirjana Maletić-Savatić; Jin Wang
Journal:  Nat Commun       Date:  2017-07-13       Impact factor: 14.919

4.  Naphthalene-based fluorescent probes for glutathione and their applications in living cells and patients with sepsis.

Authors:  Jun Li; Younghee Kwon; Kyung Soo Chung; Chang Su Lim; Dayoung Lee; Yongkang Yue; Jisoo Yoon; Gyoungmi Kim; Sang-Jip Nam; Youn Wook Chung; Hwan Myung Kim; Caixia Yin; Ji-Hwan Ryu; Juyoung Yoon
Journal:  Theranostics       Date:  2018-02-03       Impact factor: 11.556

5.  An ultrasensitive fluorogenic probe for revealing the role of glutathione in chemotherapy resistance.

Authors:  Yuejing Jiang; Juan Cheng; Chengyu Yang; Yongzhou Hu; Jia Li; Yifeng Han; Yi Zang; Xin Li
Journal:  Chem Sci       Date:  2017-10-04       Impact factor: 9.825

6.  Real-Time Monitoring of Glutathione in Living Cells Reveals that High Glutathione Levels Are Required to Maintain Stem Cell Function.

Authors:  Eui Man Jeong; Ji-Hye Yoon; Jisun Lim; Ji-Woong Shin; A Young Cho; Jinbeom Heo; Ki Baek Lee; Jin-Haeng Lee; Won Jong Lee; Hyo-Jun Kim; Young Hoon Son; Seok-Jin Lee; Sung-Yup Cho; Dong-Myung Shin; Kihang Choi; In-Gyu Kim
Journal:  Stem Cell Reports       Date:  2018-01-04       Impact factor: 7.765

7.  A Rationally Designed Reversible 'Turn-Off' Sensor for Glutathione.

Authors:  Sabrina Heng; Xiaozhou Zhang; Jinxin Pei; Andrew D Abell
Journal:  Biosensors (Basel)       Date:  2017-09-06

8.  Nucleophilicity of Glutathione: A Link to Michael Acceptor Reactivities.

Authors:  Robert J Mayer; Armin R Ofial
Journal:  Angew Chem Int Ed Engl       Date:  2019-10-31       Impact factor: 15.336

9.  Efficient switching of mCherry fluorescence using chemical caging.

Authors:  Bas M C Cloin; Elke De Zitter; Desiree Salas; Vincent Gielen; Gert E Folkers; Marina Mikhaylova; Maike Bergeler; Bartosz Krajnik; Jeremy Harvey; Casper C Hoogenraad; Luc Van Meervelt; Peter Dedecker; Lukas C Kapitein
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-19       Impact factor: 11.205

10.  Enhancing intracellular accumulation and target engagement of PROTACs with reversible covalent chemistry.

Authors:  Wen-Hao Guo; Xiaoli Qi; Xin Yu; Yang Liu; Chan-I Chung; Fang Bai; Xingcheng Lin; Dong Lu; Lingfei Wang; Jianwei Chen; Lynn Hsiao Su; Krystle J Nomie; Feng Li; Meng C Wang; Xiaokun Shu; José N Onuchic; Jennifer A Woyach; Michael L Wang; Jin Wang
Journal:  Nat Commun       Date:  2020-08-26       Impact factor: 14.919

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.