Literature DB >> 21574592

Transition states and energetics of nucleophilic additions of thiols to substituted α,β-unsaturated ketones: substituent effects involve enone stabilization, product branching, and solvation.

Elizabeth H Krenske1, Russell C Petter, Zhendong Zhu, K N Houk.   

Abstract

CBS-QB3 enthalpies of reaction have been computed for the conjugate additions of MeSH to six α,β-unsaturated ketones. Compared with addition to methyl vinyl ketone, the reaction becomes 1-3 kcal mol(-1) less exothermic when an α-Me, β-Me, or β-Ph substituent is present on the C=C bond. The lower exothermicity for the substituted enones occurs because the substituted reactant is stabilized more by hyperconjugation or conjugation than the product is stabilized by branching. Substituent effects on the activation energies for the rate-determining step of the thiol addition (reaction of the enone with MeS(-)) were also computed. Loss of reactant stabilization, and not steric hindrance, is the main factor responsible for controlling the relative activation energies in the gas phase. The substituent effects are further magnified in solution; in water (simulated by CPCM calculations), the addition of MeS(-) to an enone is disfavored by 2-6 kcal mol(-1) when one or two methyl groups are present on the C=C bond (ΔΔG(‡)). The use of CBS-QB3 gas-phase energies in conjunction with CPCM solvation corrections provides kinetic data in good agreement with experimental substituent effects. When the energetics of the thiol additions were calculated with several popular density functional theory and ab initio methods (B3LYP, MPW1PW91, B1B95, PBE0, B2PLYP, and MP2), some substantial inaccuracies were noted. However, M06-2X (with a large basis set), B2PLYP-D, and SCS-MP2 gave results within 1 kcal mol(-1) of the CBS-QB3 benchmark values.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21574592     DOI: 10.1021/jo200761w

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  12 in total

1.  Selectivity of labeled bromoethylamine for protein alkylation.

Authors:  Simona Marincean; Montserrat Rabago Smith; Laci Beltz; Babak Borhan
Journal:  J Mol Model       Date:  2012-05-29       Impact factor: 1.810

2.  Michael-type cyclizations in lantibiotic biosynthesis are reversible.

Authors:  Xiao Yang; Wilfred A van der Donk
Journal:  ACS Chem Biol       Date:  2015-03-10       Impact factor: 5.100

3.  The Chemical Basis of Thiol Addition to Nitro-conjugated Linoleic Acid, a Protective Cell-signaling Lipid.

Authors:  Lucía Turell; Darío A Vitturi; E Laura Coitiño; Lourdes Lebrato; Matías N Möller; Camila Sagasti; Sonia R Salvatore; Steven R Woodcock; Beatriz Alvarez; Francisco J Schopfer
Journal:  J Biol Chem       Date:  2016-12-06       Impact factor: 5.157

4.  Covalent Modifiers: A Chemical Perspective on the Reactivity of α,β-Unsaturated Carbonyls with Thiols via Hetero-Michael Addition Reactions.

Authors:  Paul A Jackson; John C Widen; Daniel A Harki; Kay M Brummond
Journal:  J Med Chem       Date:  2016-12-20       Impact factor: 7.446

5.  Reactivities of the Front Pocket N-Terminal Cap Cysteines in Human Kinases.

Authors:  Ruibin Liu; Shaoqi Zhan; Ye Che; Jana Shen
Journal:  J Med Chem       Date:  2021-10-14       Impact factor: 7.446

6.  Automated computational screening of the thiol reactivity of substituted alkenes.

Authors:  Jennifer M Smith; Christopher N Rowley
Journal:  J Comput Aided Mol Des       Date:  2015-07-10       Impact factor: 3.686

7.  Growth arrest by the antitumor steroidal lactone withaferin A in human breast cancer cells is associated with down-regulation and covalent binding at cysteine 303 of β-tubulin.

Authors:  Marie L Antony; Joomin Lee; Eun-Ryeong Hahm; Su-Hyeong Kim; Adam I Marcus; Vandana Kumari; Xinhua Ji; Zhen Yang; Courtney L Vowell; Peter Wipf; Guy T Uechi; Nathan A Yates; Guillermo Romero; Saumendra N Sarkar; Shivendra V Singh
Journal:  J Biol Chem       Date:  2013-12-02       Impact factor: 5.157

8.  Biomimetic Stereoselective Sulfa-Michael Addition Leads to Platensimycin and Platencin Sulfur Analogues against Methicillin-Resistant Staphylococcus aureus.

Authors:  Lin Qiu; Kai Tian; Zhongqing Wen; Youchao Deng; Dingding Kang; Haoyu Liang; Xiangcheng Zhu; Ben Shen; Yanwen Duan; Yong Huang
Journal:  J Nat Prod       Date:  2018-02-01       Impact factor: 4.050

9.  Theoretical and Experimental Investigation of Thermodynamics and Kinetics of Thiol-Michael Addition Reactions: A Case Study of Reversible Fluorescent Probes for Glutathione Imaging in Single Cells.

Authors:  Jianwei Chen; Xiqian Jiang; Shaina Carroll; Jia Huang; Jin Wang
Journal:  Org Lett       Date:  2015-11-25       Impact factor: 6.005

10.  The roles of counterion and water in a stereoselective cysteine-catalyzed Rauhut-Currier reaction: a challenge for computational chemistry.

Authors:  Sílvia Osuna; Alpay Dermenci; Scott J Miller; K N Houk
Journal:  Chemistry       Date:  2013-09-03       Impact factor: 5.236

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.