Literature DB >> 26598265

Accurate Anharmonic Vibrational Frequencies for Uracil: The Performance of Composite Schemes and Hybrid CC/DFT Model.

Cristina Puzzarini1, Malgorzata Biczysko2, Vincenzo Barone3.   

Abstract

The vibrational spectrum (frequencies as well as intensities) of uracil has been investigated at a high level of theory. The harmonic force field has been evaluated at the coupled-cluster (CC) level in conjunction with a triple-ζ basis set. Extrapolation to the basis set limit as well as inclusion of core-correlation and diffuse-function corrections have been considered by means of the second-order Møller-Plesset perturbation theory. To go beyond the harmonic approximation, a hybrid CC/DFT approach has been employed, which will be proved to provide state-of-the-art results. As the spectroscopic investigation of uracil is hampered by numerous Fermi resonances, models for explicitly taking them into account have been implemented and applied. On general grounds, the computational procedure presented is able to provide the proper accuracy to support experimental investigations of large molecules of biological interest.

Entities:  

Year:  2011        PMID: 26598265     DOI: 10.1021/ct200552m

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  19 in total

1.  Anharmonic theoretical simulations of infrared spectra of halogenated organic compounds.

Authors:  Ivan Carnimeo; Cristina Puzzarini; Nicola Tasinato; Paolo Stoppa; Andrea Pietropolli Charmet; Malgorzata Biczysko; Chiara Cappelli; Vincenzo Barone
Journal:  J Chem Phys       Date:  2013-08-21       Impact factor: 3.488

2.  Spectroscopic Characterization of Key Aromatic Molecules: A Route toward The Origin of Life.

Authors:  Cristina Puzzarini; Alberto Baiardi; Julien Bloino; Vincenzo Barone; Thomas E Murphy; Dennis Drew; Ashraf Ali
Journal:  Astron J       Date:  2017-08-04       Impact factor: 6.263

3.  CC/DFT Route toward Accurate Structures and Spectroscopic Features for Observed and Elusive Conformers of Flexible Molecules: Pyruvic Acid as a Case Study.

Authors:  Vincenzo Barone; Malgorzata Biczysko; Julien Bloino; Paola Cimino; Emanuele Penocchio; Cristina Puzzarini
Journal:  J Chem Theory Comput       Date:  2015-08-07       Impact factor: 6.006

4.  Reliable vibrational wavenumbers for C=O and N-H stretchings of isolated and hydrogen-bonded nucleic acid bases.

Authors:  Teresa Fornaro; Malgorzata Biczysko; Julien Bloino; Vincenzo Barone
Journal:  Phys Chem Chem Phys       Date:  2016-03-28       Impact factor: 3.676

5.  Anharmonic Effects on Vibrational Spectra Intensities: Infrared, Raman, Vibrational Circular Dichroism, and Raman Optical Activity.

Authors:  Julien Bloino; Malgorzata Biczysko; Vincenzo Barone
Journal:  J Phys Chem A       Date:  2015-12-01       Impact factor: 2.781

6.  Fully anharmonic IR and Raman spectra of medium-size molecular systems: accuracy and interpretation.

Authors:  Vincenzo Barone; Malgorzata Biczysko; Julien Bloino
Journal:  Phys Chem Chem Phys       Date:  2014-02-07       Impact factor: 3.676

7.  Environmental and complexation effects on the structures and spectroscopic signatures of organic pigments relevant to cultural heritage: the case of alizarin and alizarin-Mg(II)/Al(III) complexes.

Authors:  Luciano Carta; Malgorzata Biczysko; Julien Bloino; Daniele Licari; Vincenzo Barone
Journal:  Phys Chem Chem Phys       Date:  2014-02-21       Impact factor: 3.676

8.  Dispersion corrected DFT approaches for anharmonic vibrational frequency calculations: nucleobases and their dimers.

Authors:  Teresa Fornaro; Malgorzata Biczysko; Susanna Monti; Vincenzo Barone
Journal:  Phys Chem Chem Phys       Date:  2014-02-17       Impact factor: 3.676

9.  An integrated experimental and quantum-chemical investigation on the vibrational spectra of chlorofluoromethane.

Authors:  Andrea Pietropolli Charmet; Paolo Stoppa; Nicola Tasinato; Santi Giorgianni; Vincenzo Barone; Malgorzata Biczysko; Julien Bloino; Chiara Cappelli; Ivan Carnimeo; Cristina Puzzarini
Journal:  J Chem Phys       Date:  2013-10-28       Impact factor: 3.488

10.  Accurate structure, thermodynamic and spectroscopic parameters from CC and CC/DFT schemes: the challenge of the conformational equilibrium in glycine.

Authors:  Vincenzo Barone; Malgorzata Biczysko; Julien Bloino; Cristina Puzzarini
Journal:  Phys Chem Chem Phys       Date:  2013-04-19       Impact factor: 3.676

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