| Literature DB >> 26594439 |
P Kaleel Ahamed1, N Srinivasan2, R Ranjith Kumar3, R V Krishnakumar2.
Abstract
In the title compound, C16H16O4, the five-membered ring of the indene-1,3-dione unit adopts a twist conformation, whereas the seven-membered ring adopts a twist-chair conformation. In the crystal, mol-ecules are linked by O-H⋯O hydrogen bonds, weak C-H⋯O hydrogen bonds and π-π stacking [centroid-to-centroid distance = 3.7373 (8) Å] into a three-dimensional supra-molecular architecture.Entities:
Keywords: crystal structure; hydrogen bonding; indene-1,3-dione; π–π stacking
Year: 2015 PMID: 26594439 PMCID: PMC4647374 DOI: 10.1107/S2056989015016126
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C16H16O4 | |
| Mo | |
| Orthorhombic, | Cell parameters from 7469 reflections |
| θ = 2.4–27.8° | |
| µ = 0.10 mm−1 | |
| Needle, colourless | |
| 0.30 × 0.23 × 0.18 mm | |
| Bruker SMART APEXII CCD diffractometer | 2849 reflections with |
| Radiation source: fine-focus sealed tube | |
| φ and ω scans | θmax = 28.0°, θmin = 2.2° |
| Absorption correction: multi-scan ( | |
| 28734 measured reflections | |
| 3191 independent reflections |
| Refinement on | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 3191 reflections | Δρmax = 0.33 e Å−3 |
| 185 parameters | Δρmin = −0.20 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| O1 | 1.03172 (15) | 0.08184 (7) | 0.44453 (5) | 0.0593 (3) | |
| O2 | 0.56285 (14) | 0.19613 (6) | 0.45415 (5) | 0.0525 (3) | |
| O3 | 0.60520 (16) | 0.04223 (5) | 0.41294 (5) | 0.0565 (3) | |
| O4 | 0.93803 (17) | 0.25552 (5) | 0.41716 (5) | 0.0570 (3) | |
| C1 | 0.68387 (16) | 0.09552 (6) | 0.39677 (6) | 0.0357 (3) | |
| C2 | 0.73825 (16) | 0.11650 (6) | 0.32474 (6) | 0.0343 (3) | |
| C3 | 0.70883 (18) | 0.08049 (8) | 0.26203 (7) | 0.0446 (3) | |
| H3 | 0.6582 | 0.0354 | 0.2617 | 0.053* | |
| C4 | 0.75714 (19) | 0.11383 (9) | 0.20020 (7) | 0.0509 (4) | |
| H4 | 0.7383 | 0.0908 | 0.1576 | 0.061* | |
| C5 | 0.83328 (19) | 0.18099 (9) | 0.20053 (6) | 0.0487 (3) | |
| H5 | 0.8608 | 0.2028 | 0.1580 | 0.058* | |
| C6 | 0.86906 (18) | 0.21611 (7) | 0.26286 (6) | 0.0427 (3) | |
| H6 | 0.9238 | 0.2605 | 0.2631 | 0.051* | |
| C7 | 0.82010 (16) | 0.18254 (6) | 0.32509 (6) | 0.0335 (2) | |
| C8 | 0.84477 (17) | 0.20639 (6) | 0.39815 (6) | 0.0355 (3) | |
| C9 | 0.72848 (16) | 0.15854 (6) | 0.44602 (6) | 0.0334 (2) | |
| C10 | 0.81939 (16) | 0.14094 (6) | 0.51591 (6) | 0.0343 (2) | |
| H10 | 0.8396 | 0.1855 | 0.5412 | 0.041* | |
| C11 | 0.70788 (19) | 0.09172 (7) | 0.56410 (7) | 0.0434 (3) | |
| H11A | 0.5807 | 0.1009 | 0.5563 | 0.052* | |
| H11B | 0.7312 | 0.0429 | 0.5509 | 0.052* | |
| C12 | 0.7486 (3) | 0.10069 (9) | 0.64220 (7) | 0.0589 (4) | |
| H12A | 0.7260 | 0.1497 | 0.6549 | 0.071* | |
| H12B | 0.6645 | 0.0716 | 0.6686 | 0.071* | |
| C13 | 0.9388 (3) | 0.08166 (10) | 0.66515 (8) | 0.0679 (5) | |
| H13A | 0.9607 | 0.0323 | 0.6534 | 0.081* | |
| H13B | 0.9459 | 0.0860 | 0.7159 | 0.081* | |
| C14 | 1.0880 (2) | 0.12630 (9) | 0.63284 (8) | 0.0594 (4) | |
| H14A | 1.1938 | 0.1232 | 0.6627 | 0.071* | |
| H14B | 1.0494 | 0.1754 | 0.6324 | 0.071* | |
| C15 | 1.1415 (2) | 0.10527 (8) | 0.55851 (8) | 0.0547 (4) | |
| H15A | 1.2401 | 0.1358 | 0.5441 | 0.066* | |
| H15B | 1.1886 | 0.0573 | 0.5604 | 0.066* | |
| C16 | 1.00134 (17) | 0.10759 (6) | 0.50196 (7) | 0.0380 (3) | |
| H2 | 0.549 (3) | 0.2103 (10) | 0.4936 (11) | 0.070 (6)* |
| O1 | 0.0519 (6) | 0.0860 (8) | 0.0399 (5) | 0.0216 (5) | 0.0051 (4) | −0.0029 (5) |
| O2 | 0.0512 (6) | 0.0737 (7) | 0.0326 (5) | 0.0284 (5) | 0.0016 (4) | −0.0022 (4) |
| O3 | 0.0654 (7) | 0.0510 (6) | 0.0530 (6) | −0.0195 (5) | −0.0038 (5) | 0.0066 (4) |
| O4 | 0.0843 (8) | 0.0484 (5) | 0.0381 (5) | −0.0224 (5) | −0.0097 (5) | −0.0021 (4) |
| C1 | 0.0347 (6) | 0.0388 (6) | 0.0335 (6) | 0.0007 (4) | −0.0020 (4) | −0.0002 (4) |
| C2 | 0.0325 (5) | 0.0405 (6) | 0.0298 (5) | 0.0033 (4) | −0.0018 (4) | −0.0050 (4) |
| C3 | 0.0420 (7) | 0.0523 (7) | 0.0394 (7) | 0.0029 (5) | −0.0053 (5) | −0.0148 (5) |
| C4 | 0.0451 (7) | 0.0768 (10) | 0.0308 (6) | 0.0108 (7) | −0.0049 (5) | −0.0160 (6) |
| C5 | 0.0429 (7) | 0.0771 (9) | 0.0261 (6) | 0.0113 (6) | 0.0019 (5) | 0.0035 (6) |
| C6 | 0.0418 (6) | 0.0535 (7) | 0.0327 (6) | 0.0011 (5) | 0.0009 (5) | 0.0058 (5) |
| C7 | 0.0340 (5) | 0.0403 (6) | 0.0261 (5) | 0.0030 (4) | −0.0009 (4) | −0.0013 (4) |
| C8 | 0.0452 (6) | 0.0337 (5) | 0.0277 (5) | 0.0015 (5) | −0.0028 (4) | −0.0005 (4) |
| C9 | 0.0367 (6) | 0.0376 (5) | 0.0258 (5) | 0.0057 (4) | 0.0017 (4) | −0.0003 (4) |
| C10 | 0.0399 (6) | 0.0372 (6) | 0.0257 (5) | 0.0024 (5) | 0.0003 (4) | 0.0015 (4) |
| C11 | 0.0440 (7) | 0.0514 (7) | 0.0348 (6) | −0.0021 (5) | 0.0044 (5) | 0.0083 (5) |
| C12 | 0.0780 (11) | 0.0668 (9) | 0.0319 (6) | −0.0066 (8) | 0.0087 (7) | 0.0102 (6) |
| C13 | 0.0937 (13) | 0.0668 (10) | 0.0431 (8) | −0.0138 (9) | −0.0193 (8) | 0.0195 (7) |
| C14 | 0.0743 (10) | 0.0544 (8) | 0.0494 (8) | −0.0069 (7) | −0.0244 (7) | 0.0063 (6) |
| C15 | 0.0475 (8) | 0.0568 (8) | 0.0597 (9) | 0.0069 (6) | −0.0157 (7) | −0.0008 (7) |
| C16 | 0.0379 (6) | 0.0400 (6) | 0.0360 (6) | 0.0004 (5) | 0.0017 (5) | 0.0066 (5) |
| O1—C16 | 1.2163 (16) | C9—C10 | 1.5267 (15) |
| O2—C9 | 1.4262 (14) | C10—C16 | 1.5118 (17) |
| O2—H2 | 0.80 (2) | C10—C11 | 1.5442 (16) |
| O3—C1 | 1.2018 (15) | C10—H10 | 0.9800 |
| O4—C8 | 1.2113 (15) | C11—C12 | 1.5249 (18) |
| C1—C2 | 1.4818 (16) | C11—H11A | 0.9700 |
| C1—C9 | 1.5489 (16) | C11—H11B | 0.9700 |
| C2—C7 | 1.3856 (17) | C12—C13 | 1.519 (3) |
| C2—C3 | 1.3894 (16) | C12—H12A | 0.9700 |
| C3—C4 | 1.381 (2) | C12—H12B | 0.9700 |
| C3—H3 | 0.9300 | C13—C14 | 1.520 (3) |
| C4—C5 | 1.387 (2) | C13—H13A | 0.9700 |
| C4—H4 | 0.9300 | C13—H13B | 0.9700 |
| C5—C6 | 1.3833 (18) | C14—C15 | 1.521 (2) |
| C5—H5 | 0.9300 | C14—H14A | 0.9700 |
| C6—C7 | 1.3904 (16) | C14—H14B | 0.9700 |
| C6—H6 | 0.9300 | C15—C16 | 1.4961 (19) |
| C7—C8 | 1.4718 (15) | C15—H15A | 0.9700 |
| C8—C9 | 1.5448 (16) | C15—H15B | 0.9700 |
| C9—O2—H2 | 112.0 (14) | C9—C10—H10 | 107.9 |
| O3—C1—C2 | 126.28 (11) | C11—C10—H10 | 107.9 |
| O3—C1—C9 | 126.20 (11) | C12—C11—C10 | 113.91 (12) |
| C2—C1—C9 | 107.22 (9) | C12—C11—H11A | 108.8 |
| C7—C2—C3 | 120.82 (11) | C10—C11—H11A | 108.8 |
| C7—C2—C1 | 110.77 (9) | C12—C11—H11B | 108.8 |
| C3—C2—C1 | 128.33 (12) | C10—C11—H11B | 108.8 |
| C4—C3—C2 | 117.88 (13) | H11A—C11—H11B | 107.7 |
| C4—C3—H3 | 121.1 | C13—C12—C11 | 115.93 (14) |
| C2—C3—H3 | 121.1 | C13—C12—H12A | 108.3 |
| C3—C4—C5 | 121.17 (12) | C11—C12—H12A | 108.3 |
| C3—C4—H4 | 119.4 | C13—C12—H12B | 108.3 |
| C5—C4—H4 | 119.4 | C11—C12—H12B | 108.3 |
| C6—C5—C4 | 121.29 (12) | H12A—C12—H12B | 107.4 |
| C6—C5—H5 | 119.4 | C12—C13—C14 | 115.37 (13) |
| C4—C5—H5 | 119.4 | C12—C13—H13A | 108.4 |
| C5—C6—C7 | 117.47 (13) | C14—C13—H13A | 108.4 |
| C5—C6—H6 | 121.3 | C12—C13—H13B | 108.4 |
| C7—C6—H6 | 121.3 | C14—C13—H13B | 108.4 |
| C2—C7—C6 | 121.30 (11) | H13A—C13—H13B | 107.5 |
| C2—C7—C8 | 109.50 (10) | C13—C14—C15 | 114.90 (14) |
| C6—C7—C8 | 129.20 (11) | C13—C14—H14A | 108.5 |
| O4—C8—C7 | 125.90 (11) | C15—C14—H14A | 108.5 |
| O4—C8—C9 | 126.13 (10) | C13—C14—H14B | 108.5 |
| C7—C8—C9 | 107.96 (9) | C15—C14—H14B | 108.5 |
| O2—C9—C10 | 113.19 (9) | H14A—C14—H14B | 107.5 |
| O2—C9—C8 | 104.70 (9) | C16—C15—C14 | 118.64 (13) |
| C10—C9—C8 | 113.18 (10) | C16—C15—H15A | 107.7 |
| O2—C9—C1 | 105.26 (10) | C14—C15—H15A | 107.7 |
| C10—C9—C1 | 116.99 (9) | C16—C15—H15B | 107.7 |
| C8—C9—C1 | 102.19 (9) | C14—C15—H15B | 107.7 |
| C16—C10—C9 | 109.36 (9) | H15A—C15—H15B | 107.1 |
| C16—C10—C11 | 109.37 (9) | O1—C16—C15 | 120.34 (12) |
| C9—C10—C11 | 114.26 (10) | O1—C16—C10 | 119.27 (11) |
| C16—C10—H10 | 107.9 | C15—C16—C10 | 120.38 (11) |
| O3—C1—C2—C7 | 177.60 (13) | O3—C1—C9—O2 | −76.24 (15) |
| C9—C1—C2—C7 | 3.64 (13) | C2—C1—C9—O2 | 97.72 (11) |
| O3—C1—C2—C3 | 0.9 (2) | O3—C1—C9—C10 | 50.41 (17) |
| C9—C1—C2—C3 | −173.10 (12) | C2—C1—C9—C10 | −135.63 (10) |
| C7—C2—C3—C4 | −2.52 (19) | O3—C1—C9—C8 | 174.60 (13) |
| C1—C2—C3—C4 | 173.93 (12) | C2—C1—C9—C8 | −11.44 (12) |
| C2—C3—C4—C5 | 0.3 (2) | O2—C9—C10—C16 | −174.64 (10) |
| C3—C4—C5—C6 | 2.1 (2) | C8—C9—C10—C16 | −55.70 (12) |
| C4—C5—C6—C7 | −2.2 (2) | C1—C9—C10—C16 | 62.72 (13) |
| C3—C2—C7—C6 | 2.51 (18) | O2—C9—C10—C11 | 62.41 (14) |
| C1—C2—C7—C6 | −174.52 (11) | C8—C9—C10—C11 | −178.65 (10) |
| C3—C2—C7—C8 | −176.47 (11) | C1—C9—C10—C11 | −60.24 (13) |
| C1—C2—C7—C8 | 6.50 (14) | C16—C10—C11—C12 | 83.76 (14) |
| C5—C6—C7—C2 | −0.13 (18) | C9—C10—C11—C12 | −153.30 (12) |
| C5—C6—C7—C8 | 178.63 (12) | C10—C11—C12—C13 | −63.91 (18) |
| C2—C7—C8—O4 | 166.80 (13) | C11—C12—C13—C14 | 62.5 (2) |
| C6—C7—C8—O4 | −12.1 (2) | C12—C13—C14—C15 | −79.9 (2) |
| C2—C7—C8—C9 | −14.11 (13) | C13—C14—C15—C16 | 59.78 (19) |
| C6—C7—C8—C9 | 167.02 (12) | C14—C15—C16—O1 | −169.58 (14) |
| O4—C8—C9—O2 | 84.79 (15) | C14—C15—C16—C10 | 9.5 (2) |
| C7—C8—C9—O2 | −94.30 (11) | C9—C10—C16—O1 | −19.61 (16) |
| O4—C8—C9—C10 | −38.94 (17) | C11—C10—C16—O1 | 106.21 (14) |
| C7—C8—C9—C10 | 141.98 (10) | C9—C10—C16—C15 | 161.33 (12) |
| O4—C8—C9—C1 | −165.63 (13) | C11—C10—C16—C15 | −72.85 (15) |
| C7—C8—C9—C1 | 15.28 (12) |
| H··· | ||||
| O2—H2···O4i | 0.80 (2) | 1.99 (2) | 2.7707 (13) | 163 (2) |
| C4—H4···O1ii | 0.93 | 2.48 | 3.2758 (17) | 144 |
| C15—H15 | 0.97 | 2.47 | 3.3998 (19) | 160 |
Hydrogen-bond geometry (, )
|
|
| H |
|
|
|---|---|---|---|---|
| O2H2O4i | 0.80(2) | 1.99(2) | 2.7707(13) | 163(2) |
| C4H4O1ii | 0.93 | 2.48 | 3.2758(17) | 144 |
| C15H15 | 0.97 | 2.47 | 3.3998(19) | 160 |
Symmetry codes: (i) ; (ii) ; (iii) .