Literature DB >> 21589134

rac-2-Hy-droxy-2-(2-oxocyclo-pent-yl)-1H-indene-1,3(2H)-dione.

J Kalyana Sundar, S Maharani, R Ranjith Kumar, S Natarajan, J Suresh, P L Nilantha Lakshman.   

Abstract

In the title compound, C(14)H(12)O(4), the indene unit is essentially planar [r.m.s. deviation = 0.0309 (1) Å] and the cyclo-penta-none ring adopts a twist form. In the crystal, mol-ecules are joined via pairs of O-H⋯O hydrogen bonds into centrosymmetric dimers.

Entities:  

Year:  2010        PMID: 21589134      PMCID: PMC3009240          DOI: 10.1107/S1600536810042856

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a similar structure, see: Penthala et al. (2009 ▶).

Experimental

Crystal data

C14H12O4 M = 244.24 Triclinic, a = 8.044 (3) Å b = 8.404 (4) Å c = 10.239 (3) Å α = 66.95 (3)° β = 74.36 (2)° γ = 68.50 (3)° V = 586.1 (4) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 293 K 0.26 × 0.22 × 0.19 mm

Data collection

Nonius MACH3 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.974, T max = 0.981 2534 measured reflections 2054 independent reflections 1886 reflections with I > 2σ(I) R int = 0.016 3 standard reflections every 60 min intensity decay: none

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.104 S = 1.07 2054 reflections 164 parameters H-atom parameters constrained Δρmax = 0.25 e Å−3 Δρmin = −0.23 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1996 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810042856/gk2301sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810042856/gk2301Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H12O4Z = 2
Mr = 244.24F(000) = 256
Triclinic, P1Dx = 1.384 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71069 Å
a = 8.044 (3) ÅCell parameters from 25 reflections
b = 8.404 (4) Åθ = 2–25°
c = 10.239 (3) ŵ = 0.10 mm1
α = 66.95 (3)°T = 293 K
β = 74.36 (2)°Block, colourless
γ = 68.50 (3)°0.26 × 0.22 × 0.19 mm
V = 586.1 (4) Å3
Nonius MACH3 diffractometer1886 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.016
graphiteθmax = 25.0°, θmin = 2.2°
ω–2θ scansh = −1→9
Absorption correction: ψ scan (North et al., 1968)k = −9→9
Tmin = 0.974, Tmax = 0.981l = −11→12
2534 measured reflections3 standard reflections every 60 min
2054 independent reflections intensity decay: none
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.038H-atom parameters constrained
wR(F2) = 0.104w = 1/[σ2(Fo2) + (0.0487P)2 + 0.2034P] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max < 0.001
2054 reflectionsΔρmax = 0.25 e Å3
164 parametersΔρmin = −0.23 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.059 (7)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.4901 (2)0.0143 (2)0.33717 (14)0.0367 (4)
C20.6584 (2)−0.1372 (2)0.32374 (19)0.0505 (4)
H2A0.7411−0.15480.38520.061*
H2B0.7191−0.11290.22540.061*
C30.5929 (3)−0.3013 (2)0.3708 (2)0.0551 (5)
H3A0.5821−0.35800.47420.066*
H3B0.6745−0.38960.32580.066*
C40.4084 (2)−0.2245 (2)0.3207 (2)0.0494 (4)
H4A0.3353−0.30640.37190.059*
H4B0.4206−0.20080.21840.059*
C50.3268 (2)−0.04868 (19)0.35711 (15)0.0367 (4)
H50.2797−0.08180.45980.044*
C60.17097 (19)0.09543 (19)0.27852 (15)0.0353 (3)
C70.2311 (2)0.1817 (2)0.11679 (15)0.0387 (4)
C80.2136 (2)0.3728 (2)0.09029 (16)0.0379 (4)
C90.2631 (2)0.5004 (2)−0.03520 (18)0.0502 (4)
H90.31690.4710−0.11860.060*
C100.2304 (3)0.6721 (2)−0.0329 (2)0.0573 (5)
H100.26180.7600−0.11630.069*
C110.1513 (3)0.7168 (2)0.0916 (2)0.0561 (5)
H110.13080.83380.09020.067*
C120.1028 (2)0.5900 (2)0.21723 (19)0.0470 (4)
H120.05080.61930.30080.056*
C130.13396 (19)0.4179 (2)0.21488 (16)0.0366 (3)
C140.09696 (19)0.2590 (2)0.33215 (15)0.0362 (3)
O10.48152 (16)0.16243 (15)0.33474 (12)0.0484 (3)
O20.03172 (15)0.02227 (15)0.29221 (13)0.0487 (3)
H2−0.0080−0.01700.37730.073*
O30.2801 (2)0.10548 (17)0.02872 (13)0.0602 (4)
O40.01604 (16)0.25544 (16)0.45179 (12)0.0502 (3)
U11U22U33U12U13U23
C10.0390 (8)0.0451 (9)0.0268 (7)−0.0147 (7)−0.0051 (6)−0.0103 (6)
C20.0385 (9)0.0636 (11)0.0529 (10)−0.0090 (8)−0.0067 (7)−0.0282 (9)
C30.0563 (11)0.0472 (10)0.0590 (11)0.0008 (8)−0.0178 (8)−0.0231 (8)
C40.0534 (10)0.0382 (9)0.0599 (10)−0.0117 (7)−0.0158 (8)−0.0162 (7)
C50.0392 (8)0.0369 (8)0.0330 (7)−0.0144 (6)−0.0043 (6)−0.0082 (6)
C60.0368 (8)0.0355 (8)0.0349 (7)−0.0164 (6)−0.0048 (6)−0.0077 (6)
C70.0419 (8)0.0409 (8)0.0338 (8)−0.0138 (6)−0.0051 (6)−0.0117 (6)
C80.0378 (8)0.0392 (8)0.0345 (7)−0.0138 (6)−0.0071 (6)−0.0064 (6)
C90.0581 (10)0.0529 (10)0.0353 (8)−0.0246 (8)−0.0039 (7)−0.0043 (7)
C100.0668 (12)0.0465 (10)0.0520 (10)−0.0299 (9)−0.0110 (9)0.0044 (8)
C110.0639 (11)0.0356 (9)0.0691 (12)−0.0193 (8)−0.0185 (9)−0.0073 (8)
C120.0483 (9)0.0397 (9)0.0527 (10)−0.0113 (7)−0.0083 (7)−0.0158 (7)
C130.0335 (7)0.0367 (8)0.0372 (8)−0.0108 (6)−0.0057 (6)−0.0087 (6)
C140.0312 (7)0.0400 (8)0.0343 (8)−0.0118 (6)−0.0028 (6)−0.0091 (6)
O10.0516 (7)0.0463 (7)0.0537 (7)−0.0207 (5)−0.0116 (5)−0.0145 (5)
O20.0464 (7)0.0514 (7)0.0525 (7)−0.0268 (5)−0.0123 (5)−0.0066 (5)
O30.0894 (10)0.0528 (7)0.0402 (6)−0.0226 (7)−0.0035 (6)−0.0195 (6)
O40.0528 (7)0.0511 (7)0.0383 (6)−0.0173 (5)0.0087 (5)−0.0143 (5)
C1—O11.2116 (19)C6—C71.545 (2)
C1—C21.499 (2)C7—O31.2059 (19)
C1—C51.526 (2)C7—C81.479 (2)
C2—C31.512 (3)C8—C91.384 (2)
C2—H2A0.9700C8—C131.393 (2)
C2—H2B0.9700C9—C101.378 (3)
C3—C41.528 (3)C9—H90.9300
C3—H3A0.9700C10—C111.391 (3)
C3—H3B0.9700C10—H100.9300
C4—C51.531 (2)C11—C121.379 (3)
C4—H4A0.9700C11—H110.9300
C4—H4B0.9700C12—C131.383 (2)
C5—C61.534 (2)C12—H120.9300
C5—H50.9800C13—C141.469 (2)
C6—O21.4160 (18)C14—O41.2169 (18)
C6—C141.536 (2)O2—H20.8200
O1—C1—C2126.74 (15)C5—C6—C14110.99 (12)
O1—C1—C5124.60 (14)O2—C6—C7107.82 (12)
C2—C1—C5108.66 (13)C5—C6—C7113.02 (12)
C1—C2—C3104.51 (14)C14—C6—C7102.49 (12)
C1—C2—H2A110.9O3—C7—C8126.80 (14)
C3—C2—H2A110.9O3—C7—C6125.30 (14)
C1—C2—H2B110.9C8—C7—C6107.89 (13)
C3—C2—H2B110.9C9—C8—C13120.56 (15)
H2A—C2—H2B108.9C9—C8—C7129.09 (15)
C2—C3—C4103.75 (14)C13—C8—C7110.35 (13)
C2—C3—H3A111.0C10—C9—C8118.04 (17)
C4—C3—H3A111.0C10—C9—H9121.0
C2—C3—H3B111.0C8—C9—H9121.0
C4—C3—H3B111.0C9—C10—C11121.33 (16)
H3A—C3—H3B109.0C9—C10—H10119.3
C3—C4—C5102.74 (13)C11—C10—H10119.3
C3—C4—H4A111.2C12—C11—C10120.90 (17)
C5—C4—H4A111.2C12—C11—H11119.6
C3—C4—H4B111.2C10—C11—H11119.6
C5—C4—H4B111.2C11—C12—C13117.90 (17)
H4A—C4—H4B109.1C11—C12—H12121.1
C1—C5—C4103.78 (13)C13—C12—H12121.1
C1—C5—C6114.77 (12)C12—C13—C8121.28 (14)
C4—C5—C6117.09 (13)C12—C13—C14129.02 (15)
C1—C5—H5106.9C8—C13—C14109.69 (14)
C4—C5—H5106.9O4—C14—C13126.49 (15)
C6—C5—H5106.9O4—C14—C6124.45 (13)
O2—C6—C5111.26 (12)C13—C14—C6109.03 (12)
O2—C6—C14110.92 (12)C6—O2—H2109.5
O1—C1—C2—C3166.12 (15)O3—C7—C8—C13173.24 (16)
C5—C1—C2—C3−13.03 (17)C6—C7—C8—C13−5.46 (17)
C1—C2—C3—C433.50 (18)C13—C8—C9—C10−0.3 (2)
C2—C3—C4—C5−41.27 (18)C7—C8—C9—C10179.19 (16)
O1—C1—C5—C4168.45 (14)C8—C9—C10—C110.5 (3)
C2—C1—C5—C4−12.37 (16)C9—C10—C11—C12−0.1 (3)
O1—C1—C5—C639.4 (2)C10—C11—C12—C13−0.5 (3)
C2—C1—C5—C6−141.39 (14)C11—C12—C13—C80.7 (2)
C3—C4—C5—C132.54 (16)C11—C12—C13—C14179.53 (15)
C3—C4—C5—C6160.13 (14)C9—C8—C13—C12−0.3 (2)
C1—C5—C6—O2174.96 (11)C7—C8—C13—C12−179.90 (14)
C4—C5—C6—O252.92 (18)C9—C8—C13—C14−179.32 (14)
C1—C5—C6—C14−61.01 (16)C7—C8—C13—C141.09 (17)
C4—C5—C6—C14176.94 (12)C12—C13—C14—O47.0 (3)
C1—C5—C6—C753.49 (17)C8—C13—C14—O4−174.07 (15)
C4—C5—C6—C7−68.56 (17)C12—C13—C14—C6−175.15 (15)
O2—C6—C7—O3−54.4 (2)C8—C13—C14—C63.77 (16)
C5—C6—C7—O369.0 (2)O2—C6—C14—O456.38 (19)
C14—C6—C7—O3−171.52 (16)C5—C6—C14—O4−67.85 (19)
O2—C6—C7—C8124.29 (13)C7—C6—C14—O4171.22 (14)
C5—C6—C7—C8−112.31 (14)O2—C6—C14—C13−121.51 (13)
C14—C6—C7—C87.21 (15)C5—C6—C14—C13114.26 (13)
O3—C7—C8—C9−6.3 (3)C7—C6—C14—C13−6.67 (15)
C6—C7—C8—C9174.99 (15)
D—H···AD—HH···AD···AD—H···A
O2—H2···O4i0.822.092.791 (2)143
C2—H2A···O4ii0.972.603.560 (2)171
C2—H2B···O3iii0.972.583.423 (2)146
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2⋯O4i0.822.092.791 (2)143

Symmetry code: (i) .

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